Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02057 ATGCAGGTTGGTTTGATGCTAGATTCTACAGAAATGAAAAACCAAAACCAGTTCACTCCAAAGGCATTTGCAATTCGCTATTGGGATAGAGTGATCAAGAACAACTTGCCAAAGCCATCCTTCATCCTCTCCAAGACTTCACCCCTTAGTGCCGCGGACGCATCTTCTTTTGCAAAGTACGCGAGCGCTAACACACTATCCACAAAGTTACCGGAATTCTGCTCTGCCGCAAAACTCCTCTGCTTCTTGGATATAAATCCAGAAAGTTATCGTAAAGGAGTTGATTTAGACAAGAAGCTTAGCTTCACAACTTACGGGATTACCAACCCTTTCAAAGATTATGCCAAAAGAGGTGTTTTATTCGGCATCTACGCTAAATCTTCTTCAACTAATTCTAATACACGTTTGGTAAAAAATTGGGTTCAGTCGGGTAGGTTTTTCCGCGAAAGGATGCTGAAGGAAGGGGTGGTTATGCACATGCCAGATATAAGGGACAAATTACCAAAAAGATCGTTTTTGCCTCGCTCCATTTTGACCAAATTTCCTTTTGCATCTTCTAAGTTAGACGAGATGAAGCAAGTTTTCAAGGTGTCTAAGAATTCTTCTATGGAAAAGATGATAGTGAATTCATTGAATGAGTGTGAGAAGGTGCCAAGTAAGGGTGAGGTCAAGCGTTGTGTGGGTTCACTTGAGGATATGATTGATTTTGCAACTTCTATTTTGGGTCGCAATGTGACGGTTCGATCCACTAAAAATGTAAATGGATCGAATAAAAATATTATGTTGAGTCAAGTTAGAGGAATAAACCATGGGAAAGTTATAGAGTCTGTATCTTGTCACCAAAGCTTGTTTCCTTACTTGTTATACTACTGCCACTCGGTTCCCAAGGTTCGAGTTTATGAAGCGGATCTTTTGGACCCTCGGTCTAAGTTCAAGATTAATCATGGTGTTGCAATCTGCCACTTGGACACAACAGCTTGGAGTTCTACCCATGGTGCATTTGTGGCACTTGGATCTGGTCCGGGTCAAATTGAAGTGTGTCATTGGATCTTTGAAAATGATATGATCTGGACTATTGCTGATTGA 1086 0.4098 MQVGLMLDSTEMKNQNQFTPKAFAIRYWDRVIKNNLPKPSFILSKTSPLSAADASSFAKYASANTLSTKLPEFCSAAKLLCFLDINPESYRKGVDLDKKLSFTTYGITNPFKDYAKRGVLFGIYAKSSSTNSNTRLVKNWVQSGRFFRERMLKEGVVMHMPDIRDKLPKRSFLPRSILTKFPFASSKLDEMKQVFKVSKNSSMEKMIVNSLNECEKVPSKGEVKRCVGSLEDMIDFATSILGRNVTVRSTKNVNGSNKNIMLSQVRGINHGKVIESVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPRSKFKINHGVAICHLDTTAWSSTHGAFVALGSGPGQIEVCHWIFENDMIWTIAD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02057 361 ProSiteProfiles BURP domain profile. 146 360 IPR004873 -
Trre15g02057 361 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 89 - -
Trre15g02057 361 SMART BURP_2 144 360 IPR004873 -
Trre15g02057 361 Pfam BURP domain 146 358 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02057 Trre-Chr15 16689356 16690441 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02057 - - mtr:25501333 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02057 15 16689356 16690441 Trre5g02672 5 21033339 21035387 ECH
Trre15g02057 15 16689356 16690441 Trre15g02057 15 16689356 16690441 ECH
Trre9g02202 9 23872284 23874294 Trre15g02057 15 16689356 16690441 PCT