Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02202 ATGAACAAACAACTCATCCTTGTCTGTCTCTTTTTCCTCTTCTCATCTATCACTGTTAATTCCGCCGGAGATGCGGTGGCCGGAGAAAAAAACCCATTCACACCAAAAGCATATCTGAATCGTTATTGGGACAAAGAGATCCGCAACGGTTTACCAAAACCGTCGTTCTTGTTCTCCAAAGCGTCACCGTTGAGCACAGTGGAAACAGCAACTTTTGCTAAACTCGCCGCCGGTTACACACTCTCCACACGGCTGCCGGAATTTTGCTCCGCCGCAAATCTCCTCTGTATCCCTGAAGTTGCTCAGAGTCTTGAAAAACATGATAAGGATGGAAGTTTCGCTGTGTACGGAGATAAAAACTTCACAAACTACGGAACGAGTCGACCCGGTGGAGTTGACTCGTTCAAAAACTACTCCGACGGAGCAAACATTCCGGTGAACGATTTCCGTCGCTACAGCCGTAACTCAGCCGGCCATGAAGAAAGTTTCACCAGCTACGCCACAGAAGGAAACGTCGTTGATCAAAGCTTCCACACTTACGGCGCCGGAGCAACAGGCGGCGCCGGCGAGTTCAAACAATACGCCGACGAAACCAACGTTCCTAACTTAGTTTTCTCTTCTTACTCCGATAACGCCAATGGAAGAACACAATCATTCAACTCTTACACCGAAAACGGCAATGCCGGAGAACAATCGTTTTCTTCCTATGGTAAAAACGGTAATGGCCCCACCGAAGAATTCACCAATTATGGAACAAATTCCAATGTTGCTGGATCGGGTTTTTCAAACTACGCCGAAACCTCGAATGCTGGTAACGACAGTTTTAAAGGTTACGGCGTAGATATGAATAACCCGACCAATACTTTTTCTAACTATGCTAACGGAGGTAACGGCGCAATTCAAACATTTTCAACTTACCGTGAAAAAGCTAACGTTGGTGCTGATTCTTTTACAAGCTATGCAAAAACTTCAAATGCAGCAAAAATTGGTTTCAACAATTATGGAAAATCATTCAATGAAGGAACTGATACATTCACAAGCTATGCTAAAACATCAACAGGTGAAACAAAAGTTGATTTTAAAGGCTATGGTGTTAACAATACATTCAAAGAGTATTCAAAAGAAGGTGTTTCTTTTGCAAAGTATACAAACGTGAGTTCAAGTTTAAGTGCTTCTGTTGTAGAGAAAAAAAATACGGTGGTGGAGGGTAATTTGGTAAAAAAATGGGTTGAACCGGGTAAGTTCTTTAGAGAAAAGATGTTGAAAGAAGGAACTGTTATGCATATGCCTGATATTAGTGATAAGTTACCGAAAAGGTCGTTTTTACCGCGGAGTATACTTGCGAAATTACCATTTTCTACTTCAAAAATCGATGAAATGAAACGGTTATTTAAAGCTTCGGATAATGGTTCAATGGAGAAGATGATGAGAGATTCATTGGGTGAATGTGAGAGAGTTCCGAGCCGCGGTGAGACAAAGCGATGTGTGGGGTCTATTGAGGATATGGTTGATTTTGCAACTTCTGTTTTGGGTCGAAATGTTGTGGTTCGGACTACTCAGAATTTAAATGGGTCGAAGAAGAGTGTTATGGTGGGTCGGGTTATTGGAATAAACGGTGGGAAAGTGACCCGGTCTGTTTCGTGTCATCAAAGTTTGTTTCCTTACTTGCTTTATTATTGTCACTCGGTTCCTAAGGTTCGAGTTTATCAGGCTGATCTACTTGACCCAAAAACTAAGGATAAGATAAATCAAGGTGTTGCGGTTTGCCACTTGGATACTTCTGATTGGAGTGCTAGTCATGGAGCTTTTATGTCACTTGGGTCGGGTCCGGGTCAAATTGAGGTTTGTCACTGGATTTTCGAGAATGATATGTCTTGGACAGTTGCTGATTGA 1893 0.4247 MNKQLILVCLFFLFSSITVNSAGDAVAGEKNPFTPKAYLNRYWDKEIRNGLPKPSFLFSKASPLSTVETATFAKLAAGYTLSTRLPEFCSAANLLCIPEVAQSLEKHDKDGSFAVYGDKNFTNYGTSRPGGVDSFKNYSDGANIPVNDFRRYSRNSAGHEESFTSYATEGNVVDQSFHTYGAGATGGAGEFKQYADETNVPNLVFSSYSDNANGRTQSFNSYTENGNAGEQSFSSYGKNGNGPTEEFTNYGTNSNVAGSGFSNYAETSNAGNDSFKGYGVDMNNPTNTFSNYANGGNGAIQTFSTYREKANVGADSFTSYAKTSNAAKIGFNNYGKSFNEGTDTFTSYAKTSTGETKVDFKGYGVNNTFKEYSKEGVSFAKYTNVSSSLSASVVEKKNTVVEGNLVKKWVEPGKFFREKMLKEGTVMHMPDISDKLPKRSFLPRSILAKLPFSTSKIDEMKRLFKASDNGSMEKMMRDSLGECERVPSRGETKRCVGSIEDMVDFATSVLGRNVVVRTTQNLNGSKKSVMVGRVIGINGGKVTRSVSCHQSLFPYLLYYCHSVPKVRVYQADLLDPKTKDKINQGVAVCHLDTSDWSASHGAFMSLGSGPGQIEVCHWIFENDMSWTVAD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02202 630 Pfam BURP domain 415 627 IPR004873 -
Trre9g02202 630 ProSiteProfiles BURP domain profile. 415 629 IPR004873 -
Trre9g02202 630 SMART BURP_2 413 629 IPR004873 -
Trre9g02202 630 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02202 Trre-Chr9 23872284 23874294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02202 - - gmx:100776642 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02202 9 23872284 23874294 Trre9g02202 9 23872284 23874294 ECH
Trre9g02202 9 23872284 23874294 Trre15g02057 15 16689356 16690441 PCT