Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4671 ATGGCGGCAAATTCTTCTAATGGAGATCAACAAACAACCACAAAGCAACCTCCCCAGCCATCTCCGTTGCGGTTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTCACCGGAGGAGCTGGTTTTATTGGTTCTCACCTAGTTGACAGATTGATGGAAAATGAAAAAAACGAGGTAATTGTAGCTGATAACTACTTCACTGGATCTAAAGACAACCTTAAAAAATGGATTGGTCATCCAAGATTTGAGCTAATTCGTCATGATGTGACAGAGCAACTGTTGGTTGAGGTTGATCGGATCTACCATCTTGCATGCCCTGCTTCTCCGATTTTCTACAAATACAACCCTGTGAAGACAATAAAGACAAATGTAATTGGAACACTGAACATGCTTGGACTTGCAAAGAGAGTTGGAGCAAGGATTTTGCTTACTTCTACTTCAGAAGTATATGGAGACCCTCTTGTGCATCCACAACCAGAAAGCTATTGGGGAAATGTTAACCCTATTGGTGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGTAACTTCATCGCTCAAGCAATTCGTGGTGAACCCCTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCCGACATGGTTGATGGCCTTATTCGTCTCATGGAAGGAGAACACACTGGTCCGATCAACATTGGAAACCCAGGTGAATTTACTATGACTGAACTTGCTGAGAATGTGAAAGAGCTTATTAATCCAGATGTGGAGATAAAAATGGTGGAGAACACTCCGGACGATCCTCGGCAAAGAAAACCAATCATAACAAAAGCAACTGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGTGATGGTCTTCCGCTTATGGAAGAGGATTTCCGTCTGAGGCTCGGAGTTCCCAAGAAGAACTAA 1041 0.4284 MAANSSNGDQQTTTKQPPQPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGEHTGPINIGNPGEFTMTELAENVKELINPDVEIKMVENTPDDPRQRKPIITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPKKN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4671 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 346 - -
Tpr7g4671 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Tpr7g4671 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Tpr7g4671 346 Gene3D - 32 339 - -
Tpr7g4671 346 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g4671 346 CDD UGD_SDR_e 33 337 - -
Tpr7g4671 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 346 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4671 Tpr-Chr7 55043207 55047800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4671 30 329 Miscellaneous Gene Families AT1G02000 23.881 5.94e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4671 K08678 - qsu:112026144 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4671 7 55043207 55047800 Tpr7g4671 7 55043207 55047800 ECH
Tpr7g4671 7 55043207 55047800 Tpr3g2056 3 18888325 18892741 ECH
Tpr7g4671 7 55043207 55047800 Tpr4g1604 4 16117066 16120231 PCT