Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1604 ATGGCTTCTCCTTCTTCAACACGCTTAGATCTCGACGGTAACCCTATCAAACCTTTAACAATCTGTATGATCGGCGCCGGAGGTTTCATCGGTTCTCATCTCTGTGAAAAACTCATGTCTGAAACTTCTCATAAAGTTCTCGCTTTAGATGTTTACAGTGACAAAATCAAGCATCTTTTAGAACCTGAATCTCTTCCTTGGAATGGTCGCATTCACTTTCACCGTCTTAATATTAAGAATGATTCTAGACTTGAAGGTCTCATCAAGATGGCAGATCTGGTTATAAATCTGGCTGCAATTTGTACTCCTGCTGATTACAATACGCGTCCACTTGATACAATTTATAGCAATTTCATTGATGCACTACCTGTGGTGAAGATCTGTTCTGATACTAATAAGAGGCTTATTCATTTCTCTACTTGTGAAGTGTATGGAAAAACTATTGGAAGTTTTCTTCCAAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTATGTTCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTCCAATCGAAAAGCAGAGATGGTCGTATGCTTGTGCAAAGCAGTTGATTGAGAGACTGGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTTACAATTGTGAGGCCATTTAATTGGATTGGACCCAGAATGGACTTCATTCCCGGTATTGACGGTCCAAGTGAGGGTGTTCCTCGAGTTCTTGCATGCTTCAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGATGGTGGTGAATCCCAGAGAACCTTTGTTTACATCAAAGATGCTATTGAAGCCGTCTTATTGATGATTGAAAATCCTGCCAGAGCCAATGGCCACATCTTTAATGTTGGTAACCCAAACAATGAGGTTACAGTTAGGCAACTTGCTGAAATGATGACCAAGGTCTATACAAAGGTTAGTGGAGATCAACCTCCTGAAACACCTACAATTGATGTGAGCTCAAAAGAATTTTATGGTGAAGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTCGGATGGAATCCAAAGACCTCACTTTGGGATCTGCTTGAATCCACACTTACCTATCAGCACAGGACATATGCTGAAGCCATTAAGAAAGTCATTGCACAACCTATTACAAGTTAA 1173 0.4075 MASPSSTRLDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYSDKIKHLLEPESLPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPVVKICSDTNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGPIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTKVYTKVSGDQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAQPITS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1604 390 Pfam NAD dependent epimerase/dehydratase family 21 291 IPR001509 -
Tpr4g1604 390 Gene3D - 19 381 - -
Tpr4g1604 390 PANTHER - 7 389 - -
Tpr4g1604 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 389 - -
Tpr4g1604 390 CDD Arna_like_SDR_e 20 375 IPR045869 GO:0016831
Tpr4g1604 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 373 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1604 Tpr-Chr4 16117066 16120231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1604 K12449 - gmx:100792879 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1604 4 16117066 16120231 Tpr4g1604 4 16117066 16120231 ECH
Tpr7g4671 7 55043207 55047800 Tpr4g1604 4 16117066 16120231 PCT