Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4645 ATGACAAAACAATTGACAGGAAAAAGGGATGATACACGTTTGCATTCTGCAGCAAGAGCAGGGAATTTAGATATTGTAAGGGATACCCTTAATTCTGCCGAGGAGGATGAATTGCTTGAATTATTGGCTAGGCAGAATCAAGATGGAGAAACGGCTCTTTATGTTGCTGCTGAGTATGGTTATATTGATGTTGTTAGAGAAATGATTCAATATTATGATCTTGTGGATGCTGGAATTAAAGCAAGAAATGGTTTTGATGCATTTCACATTGCTGCCAAACAAGGGGATATAGATATATTGAAGATCCTTATGGAGGTTCATCCTGATTTGTCAATGACAGTGGATCCATCAAACACAACAGCATTACACACAGCTGCAACCCAAGGACATATTGAAATAGTAAAATTCCTACTGGAAGCTGGAAGTAGTTTAGCAACCATTGCTAAAAGTAATGGGAAAACAGCACTTCATTCTGCTGCAAGAAATGGACATTTGGAAGTTGTGAAAGCACTTGTTGAGAAAGAGCCTGGTGTTGCAATAAGGACTGATAAGAAGGGCCAAACAGCACTTCACATGGCAGTGAAAGGACAAAATCTTGAGGTAGTGGAGGCATTGATAAAAGCAGATCCTTCAACAATAAACATGATTGATAATAAGGGAAACACTCCATTGCATATAGCAACCAGAAAAGCCAGGGCACAGATTGTAAAAATGCTTCTAGGACGGCAAGAAACAAATCTAAGTGCTGTTAACAGATCAGGCGAAACAGCAGTAGACACTGCTGAGAAAATAGGGAACCAAGATATCAAAGCCATTCTATTAGAACATGGTGTTCAAAGTGCCAAATCCATAAAACCACAAGCAACGACAACAGCTCGCGAGTTAAAACAAACCGTAAGCGACATAAAGCACGAGGTACATTACCAATTAGAACACACGCGCCAAACGCGGAAACGTGTTCAAGGAATCGCGAAACGTATCAACAAGATGAATACAGAAGGATTAAACAATGCAATAAACTCAACAACCGTTGTAGCAGTACTAATAGCAACAGTTGCATTTGCCGCGATTTTCACTGTCCCTGGTCAATTTGTTGATGATCCAAACAATATTCCAGAAGGGATGACACTTGGTGAAGCAAATATAGCTCCACAAGCACCATTTGTAATTTTCTTTGTGTTTGATTCTATTGCACTCTTTATTTCTCTGGCTGTTGTGGTTGTTCAAACTTCGGTCGTCGTTATAGAAAGCAAAGCAAAGAAACAAATGGCAGCTATTATTAATAAGCTAATGTGGATAGCTTGTGTACTTGTTTCTGTGGCATTTTTGGCATTGTCATTTGTTGTGGTTGGAAAGGAAGAAAAGTGGTTGGCAATTTTTGTTACCATTATAGGGACAACTATAATGGCTACAACTTTGGGAACTATGTTGTATTGGGTTATTAAGCATCGAATTGAAGCAAAAAATTTGAGGAATATAAGGAAATCTTCAATGGAAAGCAAGTCAAAATCTTTTTCAGTGACTGCTTATTCAGATTCTGAGCTGATGAACAATGATTTTAAGAAAATGTATGCTATTTAG 1581 0.3833 MTKQLTGKRDDTRLHSAARAGNLDIVRDTLNSAEEDELLELLARQNQDGETALYVAAEYGYIDVVREMIQYYDLVDAGIKARNGFDAFHIAAKQGDIDILKILMEVHPDLSMTVDPSNTTALHTAATQGHIEIVKFLLEAGSSLATIAKSNGKTALHSAARNGHLEVVKALVEKEPGVAIRTDKKGQTALHMAVKGQNLEVVEALIKADPSTINMIDNKGNTPLHIATRKARAQIVKMLLGRQETNLSAVNRSGETAVDTAEKIGNQDIKAILLEHGVQSAKSIKPQATTTARELKQTVSDIKHEVHYQLEHTRQTRKRVQGIAKRINKMNTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPNNIPEGMTLGEANIAPQAPFVIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMAAIINKLMWIACVLVSVAFLALSFVVVGKEEKWLAIFVTIIGTTIMATTLGTMLYWVIKHRIEAKNLRNIRKSSMESKSKSFSVTAYSDSELMNNDFKKMYAI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 219 240 IPR002110 GO:0005515
Tpr7g4645 526 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 526 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 83 111 - -
Tpr7g4645 526 Gene3D - 2 146 IPR036770 -
Tpr7g4645 526 SUPERFAMILY Ankyrin repeat 14 278 IPR036770 -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Tpr7g4645 526 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 526 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 151 174 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Tpr7g4645 526 Pfam Domain of unknown function 333 449 IPR026961 -
Tpr7g4645 526 Pfam Ankyrin repeats (3 copies) 76 144 IPR002110 GO:0005515
Tpr7g4645 526 Pfam Ankyrin repeats (3 copies) 151 210 IPR002110 GO:0005515
Tpr7g4645 526 Pfam Ankyrin repeats (3 copies) 10 71 IPR002110 GO:0005515
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat region circular profile. 219 240 - -
Tpr7g4645 526 SMART ANK_2a 83 112 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 48 77 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 117 146 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 9 38 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 219 249 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 151 180 IPR002110 GO:0005515
Tpr7g4645 526 SMART ANK_2a 185 215 IPR002110 GO:0005515
Tpr7g4645 526 Gene3D - 147 334 IPR036770 -
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Tpr7g4645 526 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Tpr7g4645 526 Pfam Ankyrin repeat 220 251 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4645 Tpr-Chr7 54847728 54853818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4645 1 526 Miscellaneous Gene Families AT1G07710 73.574 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4645 - - gmx:100779230 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4645 7 54847728 54853818 Tpr7g4645 7 54847728 54853818 ECH
Tpr7g4645 7 54847728 54853818 Tpr4g1780 4 18478995 18482932 ECH
Tpr6g0960 6 8432115 8435706 Tpr7g4645 7 54847728 54853818 ECH