Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1252 ATGGTGAAGGGTCCAGGTCTTTACTCCGATATCGGCAAGAGAGCTAGAGATCTTTTGTTCAAAGATTATCAGAATGACCACAAGTTCACAATCACCACTCAGACTTCAACTGGAGTTGAAATCACTTCATCTGGAGTCAGGAAAGGTGAGATATTTTTGGCTGATGTCAGTACTAAGTTGAGGAACAAGAACATCACCACTGATGTTAAAGTTGACACTAACTCAAATCTACTCACAACCATTACTGTGGATGAACCTGCACCTGGACTCAAGACAATTTTTAGCTTCATTTTTCCAGATCAAAAATCTGGCAAGGTGGAACTACAGTACCAGCATGATTATGCTGGGATCAGTACTAGCATTGGTTTGACAGCAAGTCCCATTGTGAACTTCTCTGGTGTGCTTGGGAACAATTTGGTTTCTGTTGGATCAGATGTTTCCTTTGATACTTCAACTGGCGACTTTATCAAGTACAATGCAGGGTTGAATGTCACTCATGCTGACCTTATTGCATCTCTGACTCTCAATGATAAAGGTGACACCCTTAATGCCTCGTATTACCATGTTGTGAGCCCACTTACAAACACTGCTGTTGGAGCGGAGCTTTCACATACCTTTTCCAGCAATGAGAATATACTGACCATCGGCACACAACATGCTCTTGACCCCATAACCTTGTTGAAAGCTCGGGTGAACAATTATGGCAGGGCAAGTGCTGTGATCCAGCATGACTGGAGTCCAAAAGCACGTTTCTCTCTCGTTAGTGAAGTTGATACTGCGGCTATTGATAAGAGTGCAAAGGTTGGTCTTGCTGTGGCCTTGAAGCCTTAG 831 0.4332 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTQTSTGVEITSSGVRKGEIFLADVSTKLRNKNITTDVKVDTNSNLLTTITVDEPAPGLKTIFSFIFPDQKSGKVELQYQHDYAGISTSIGLTASPIVNFSGVLGNNLVSVGSDVSFDTSTGDFIKYNAGLNVTHADLIASLTLNDKGDTLNASYYHVVSPLTNTAVGAELSHTFSSNENILTIGTQHALDPITLLKARVNNYGRASAVIQHDWSPKARFSLVSEVDTAAIDKSAKVGLAVALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1252 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Tpr7g1252 276 Gene3D Porin 1 275 IPR023614 -
Tpr7g1252 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr7g1252 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr7g1252 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr7g1252 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1252 Tpr-Chr7 13009767 13012674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1252 K15040 - gmx:100787662 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1252 7 13009767 13012674 Tpr7g1252 7 13009767 13012674 ECH
Tpr7g1252 7 13009767 13012674 Tpr5g3005 5 53019863 53021982 ECH
Tpr7g1252 7 13009767 13012674 Tpr6g3199 6 34502747 34506258 ECH
Tpr7g1252 7 13009767 13012674 Tpr2g0374 2 4461676 4465799 ECH