Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3005 ATGAGCATAGGTCCTGGGATATTTTCAAATCTTGGGGATAAGGCCAAAGATGTTCTTTACAAGGACTATGCTGAACAATCACCAATTCACTTTCACTACAAATTCATGGATTGGAATGCAGGCTTCTCTTGTAAAGTTGTAGAAATTGTACCTGGAGTCAGGACCGTTCTCAAATGTAACTTACCGGATTCTGGGAAGGTGGAACTACAATACTGTAATAAATTCACTGGGATTACCGGACGAATTGGATTATTAGGAAATGAAGGAGGACAATATGACCCTGTTCTAAACTTCTCAGGCCTATTAGGAACAAGAATTGTGTCCTTGGGAGCCAATGTTGCCTTGCACATACCATCAAGATCAATAACCAAGCTGAATGCCGGCTTTGGCTTCAACAGTGCCTTCCTTGAAGCTTCATTGACCTTTCATGACAGCTTTGACACTTTAAAAGCGACATTATATCACGAAGTGAACCCCCTAACCCAGACTGCCATTGCAACACAGGTGAAGCATAGCTTGTCACTCCAGGAAACCGGTGTCACCATTGGTGTTCAGCATGCATTTTTTCCACAAACGTTGTTAAAGGCTCGATTTGACAGTGCTGGCAAGGCTGGTGCTCTCGTTCAACAAGGGTTTTGGCAGAGATTTTTTGTAACTATGGCTGGCGAATTGGATTTCGGGGCCGAAGATAAGACTCCTAAGTTTGGAGTTTCCATGGCACTAAGACCCTAG 732 0.4344 MSIGPGIFSNLGDKAKDVLYKDYAEQSPIHFHYKFMDWNAGFSCKVVEIVPGVRTVLKCNLPDSGKVELQYCNKFTGITGRIGLLGNEGGQYDPVLNFSGLLGTRIVSLGANVALHIPSRSITKLNAGFGFNSAFLEASLTFHDSFDTLKATLYHEVNPLTQTAIATQVKHSLSLQETGVTIGVQHAFFPQTLLKARFDSAGKAGALVQQGFWQRFFVTMAGELDFGAEDKTPKFGVSMALRP* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3005 243 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
Tpr5g3005 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr5g3005 243 Pfam Eukaryotic porin 52 236 IPR027246 GO:0005741|GO:0055085
Tpr5g3005 243 Gene3D Porin 3 242 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3005 Tpr-Chr5 53019863 53021982 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3005 K15040 - gmx:100787061 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3199 6 34502747 34506258 Tpr5g3005 5 53019863 53021982 ECH
Tpr2g0374 2 4461676 4465799 Tpr5g3005 5 53019863 53021982 ECH
Tpr7g1252 7 13009767 13012674 Tpr5g3005 5 53019863 53021982 ECH
Tpr5g3005 5 53019863 53021982 Tpr5g3005 5 53019863 53021982 ECH