Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0374 ATGTCAAAGGGTCCAGGTCTCTACTCTGACATCGGCAAAAAAGCCAGAGATCTTCTTTTCAGGGATTACAACACTGATCAGAAGTTCACTCTCACCACTTATTCACCCACTGGAGTTGCTATAACCACCTCAAGTACCAACAAAGGTGAGATTCTTTTGGGCGATATTAACACCCAGTTGAAGCACAAGAATGTCACTACTGATATCAAAGTGGACACGGATTCTAATCTCTTCACAACTATCACTGTTAACGAGGCAGCTCCTGGCCTCAAGGCTATTCTTAGCTTCAGAGTTCCTGAACAAAGGTCTGGAAAGGCTGAGATTCAGTACTTGCATGACTATGCTGGAATTTCTGCTAGCGTTGGGTTGACTGCAAACCCAATTGTCAACCTCTCTGGTGTTATTGGAACTAATGTTACTGCTCTCGGAAGTGATCTTTCTTATGACTCTAAAACTGGTGAGGTTACAAAGTTTAATGCTGGTGTGTCCTTCACCAAAGATGATTTGGTTGCTTCGTTGATTCTGAATGAAAAAGGTGATCTCTTGAATGCTTCATACTACCATGTGGTCAATCCACTTACCAAAACTGCTGTTGGTGCTGAGGTTGCCCATCGACTCTCCACCAAAGAGAACACACTCACACTTGGCACTCAGCATGCATTAGATCCTTTGACCACAGTGAAAGCTCGATTCAACAACTTCGGAAAGGCAAATGCTCTCATCCAGCACGAGTGGCGCCCAAGGTCATTCTTCACCATTTCTGGTGAGGTGGACACCAAGGCCATTGAGAAGAGTGCAAAGGTTGGAATCGCTCTGGCTCTCAAACCTTGA 831 0.4477 MSKGPGLYSDIGKKARDLLFRDYNTDQKFTLTTYSPTGVAITTSSTNKGEILLGDINTQLKHKNVTTDIKVDTDSNLFTTITVNEAAPGLKAILSFRVPEQRSGKAEIQYLHDYAGISASVGLTANPIVNLSGVIGTNVTALGSDLSYDSKTGEVTKFNAGVSFTKDDLVASLILNEKGDLLNASYYHVVNPLTKTAVGAEVAHRLSTKENTLTLGTQHALDPLTTVKARFNNFGKANALIQHEWRPRSFFTISGEVDTKAIEKSAKVGIALALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0374 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Tpr2g0374 276 Gene3D Porin 1 275 IPR023614 -
Tpr2g0374 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr2g0374 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Tpr2g0374 276 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 276 - -
Tpr2g0374 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0374 Tpr-Chr2 4461676 4465799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0374 K15040 - gmx:100777928 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0374 2 4461676 4465799 Tpr5g3005 5 53019863 53021982 ECH
Tpr2g0374 2 4461676 4465799 Tpr2g0374 2 4461676 4465799 ECH
Tpr6g3199 6 34502747 34506258 Tpr2g0374 2 4461676 4465799 ECH
Tpr7g1252 7 13009767 13012674 Tpr2g0374 2 4461676 4465799 ECH