Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0862 ATGAAGTGCCAAAACCAATTTTCGATTGCAATTTTGCTAATATCAATAACCATCCTATTTTATTCATCATTAACAAGTGCTCTTGAAGAACCTGAGTATGGATACAATGAAAAAAGTGAAAATGGACCTAAACATTGGGGTGATCTCAAAAATGAATGGGCAGCATGTAAAGGGGACATGCAATCTCCAATTGATTTGTCAAGTCACCGAGTAACTGTCATTCCAAATTTATGGAAGCTAAAGAGTAGCTACAAGCCTCAACATGCCACTGTATCCAACAGGGGTCATGATGTTGCTGTGACTTGGGAAGGTGATGCTGGCTCTATTGACATCAATGGATCAGATTATTTCCTTCAAAATAGCCATTGGCACTGGCCATCTGAACATACCATCAATGGAAGAAGGTATGACTTAGAGTTGCACTTGGTTCATGTTAGTCCTCAGCCAGATGGAACAAACAAGACTGCTGTTGTTGGTCTTCTGTACAAGTATGGTTCACCTGATCCATTTCTCTCCGAGTTGGTAAAGTACATAGTAGAAGTTCCTGATGAAGAAGAAAAAACAGACATAGGTGTTATTGATCCCTCAAAAATATTCAAGAGTTCAAAGATGTATTATAGATACATGGGATCACTCACTGCACCTCCTTGCACCGAAGGAATCACTTGGACCATTGATAGGAAGATAAGAACAGTTTCAAGAGGACAAGTGAAGTTATTGAAGAATTCTGTACTTAAATATTATGCAAAAAGGAACGCAAGGCCAGTGCAGATCTTGAATCAGAGAGAGGTTGAACTATACGACCCAAAGGCAAAGGATACACCTCACTATTAA 834 0.3921 MKCQNQFSIAILLISITILFYSSLTSALEEPEYGYNEKSENGPKHWGDLKNEWAACKGDMQSPIDLSSHRVTVIPNLWKLKSSYKPQHATVSNRGHDVAVTWEGDAGSIDINGSDYFLQNSHWHWPSEHTINGRRYDLELHLVHVSPQPDGTNKTAVVGLLYKYGSPDPFLSELVKYIVEVPDEEEKTDIGVIDPSKIFKSSKMYYRYMGSLTAPPCTEGITWTIDRKIRTVSRGQVKLLKNSVLKYYAKRNARPVQILNQREVELYDPKAKDTPHY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0862 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 268 IPR001148 -
Tpr6g0862 277 SUPERFAMILY Carbonic anhydrase 31 267 IPR036398 -
Tpr6g0862 277 PANTHER CARBONIC ANHYDRASE 1 275 IPR023561 GO:0004089|GO:0008270
Tpr6g0862 277 CDD alpha_CA_prokaryotic_like 42 266 IPR041891 -
Tpr6g0862 277 Pfam Eukaryotic-type carbonic anhydrase 41 265 IPR001148 -
Tpr6g0862 277 SMART Carb_anhydrase_2a 35 268 IPR001148 -
Tpr6g0862 277 Gene3D Alpha carbonic anhydrase 30 275 IPR036398 -
Tpr6g0862 277 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Tpr6g0862 277 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0862 Tpr-Chr6 7421095 7423653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0862 K01674 - gmx:100799362 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0862 6 7421095 7423653 Tpr1g4154 1 47990733 47994818 PCT
Tpr1g4152 1 47975263 47981153 Tpr6g0862 6 7421095 7423653 PCT