Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4154 ATGAAACACCAAAAAACACTCACAAACTTCCTTCCACATCTAGTAATCCTAGTAACTTTCCTACTCCTTTCAACAACATGGACCATAGCACAAGAAGTTGAGGATGAGAGTGACTTTGATTACATAAAAGGGAGTGAAAAGGGTCCTTCACATTGGGGTGAACTTAAGAAGGAATGGGCAACATGTAAAAATGGGAGATTGCAATCTCCAATTGATTTGTTAAGTCATAGAGTGAAGGTAGTTCCAGAGTTAGGAGAATTAAAGAAATACTATAAGCCTCATAATGCCACTATCAAGAACAGAGGTCATGATATTGAGGTTAAATGGGAGGGAGATGCAGGATCAATAAATATCAATGGCACACAATTTTTTCTACATCAAGCCCACTGGCACTCACCTTCTGAACACACCATCAATGGCAGGAGGTATGACCTGGAGGTACATTTGGTTCATGAAAGTGCAAAAATAAACGGTAAGAGCAAGATAGCTGTTATTGGACTTCTGTACGAGATTGGTCGGCCAGATCCTCTTCTCACCAAGTTGTCAAAATACATAATTAAGGGCATGGTGGATACTGAAGCAGAAAGGAGCATTGGGGTGATTGATCCCTCAGAAGAAATCAAGCTGGGTGGTAACAAGTATTACAGATACATAGGTTCCCTCACTGTCCCTCCTTGCACTGAAGATGTCATTTGGACTATTTATAACAAGATAAGAAGTGTGTCTAGAGAACAAGTGATGCTATTAAGGGAGGCTGTCTATGATCATGCTGAGAAGAATGCCAGACCTATACAACTCCTGAATAGAAGAGAGATACAACTCTTTGATAGTTAA 834 0.4005 MKHQKTLTNFLPHLVILVTFLLLSTTWTIAQEVEDESDFDYIKGSEKGPSHWGELKKEWATCKNGRLQSPIDLLSHRVKVVPELGELKKYYKPHNATIKNRGHDIEVKWEGDAGSININGTQFFLHQAHWHSPSEHTINGRRYDLEVHLVHESAKINGKSKIAVIGLLYEIGRPDPLLTKLSKYIIKGMVDTEAERSIGVIDPSEEIKLGGNKYYRYIGSLTVPPCTEDVIWTIYNKIRSVSREQVMLLREAVYDHAEKNARPIQLLNRREIQLFDS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4154 277 Gene3D Alpha carbonic anhydrase 35 277 IPR036398 -
Tpr1g4154 277 SMART Carb_anhydrase_2a 41 275 IPR001148 -
Tpr1g4154 277 PANTHER CARBONIC ANHYDRASE 14 276 IPR023561 GO:0004089|GO:0008270
Tpr1g4154 277 PANTHER ALPHA CARBONIC ANHYDRASE 3 14 276 - -
Tpr1g4154 277 CDD alpha_CA_prokaryotic_like 48 274 IPR041891 -
Tpr1g4154 277 Pfam Eukaryotic-type carbonic anhydrase 48 273 IPR001148 -
Tpr1g4154 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 276 IPR001148 -
Tpr1g4154 277 SUPERFAMILY Carbonic anhydrase 38 272 IPR036398 -
Tpr1g4154 277 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4154 Tpr-Chr1 47990733 47994818 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4154 K01674 - gmx:100797935 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0862 6 7421095 7423653 Tpr1g4154 1 47990733 47994818 PCT