Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0786 ATGGATCATTTTTCTTCTACTACTACTTCTACTATCCCTTTTGCATTACAAGGAGCAAAAGATGACATAACCATGCAAATTTCTTTGATTTGGAGTCAAATCAAAGCACCATTGATAGTTCCATTACTAAGAATATCAGTGTTTTTGTGTTTAATAATGTCGGTTATGATGTTTATTGAAAGAGTTTATATGGGTGTTGTCATTACTCTTGTGAAGCTATTTGGAAGAAAACCTGAAAAACGTTACAAATGGGAACCAATTAAGGATGATATTGAGTTAGGAAACTCTTGTTATCCAATGGTTGTTGTTCAAATCCCCATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCATGTGGTCTTTCATGGCCTTCTGATAGAATCATTATACAAGTTCTTGATGATTCTACTGACCCAACAATTAAGGAATTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGTGTGAATATAAAGTATGAAGTTAGAGACAATAGAAATGGTTACAAAGCAGGGGCATTAAAAGAAGGAATGAAGCATAGCTATGTGAAGCAATGTGATTTTGTTGCAATCTTTGATGCTGATTTTCAGCCAGAGCCTGATTTCTTATGGCGTACAGTGCCATTTATGGTGCATAATTCTGAACTTGGGCTTATTCAAGCTCGATGGAAATTTGTGAATGCTGATGAATGTATGATGACCAGAATGCAAGAGATGTCATTAGATTACCATTTTACTGTGGAACAAGAAGTGGGCTCTTCCACTTACGCTTTCTTTGGCTTCAATGGGACTGCGGGAGTTTGGAGAATTGCAGCGCTGAATGAGGCTGGTGGATGGAAAGATAGGACCACGGTTGAAGACATGGACTTGGCTGTTCGAGCTAGTCTCAAAGGATGGAAATTCTTATACTTGTCTAACTTGAAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCCTACCGTTACCAACAACATCGTTGGTCTTGCGGACCAGCCAATCTTTTCCGAAAAATGGTCATGGAGATAATTAGAAACAAGAAAGTGACCTTGTGGAAGAAGATACATGTCATTTACAGCTTCTTCTTTGTTAGAAAAGTGATAGCACACATCAATACATTTGTGTTTTACTGCATTGTACTACCGGCGACGGTTTTGGTACCTGAGGTTGCGGTCCCTAAATGGGGAGCTGTTTATATCCCTTCGGTTATCACACTTCTCAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTTGTCTTTTGGATTTTATTTGAGAATGTTATGTCTCTACATCGAGCGAAGGCTACTGTTGTTGGTCTACTTGAGACTAGTCGAGTGAATGAATGGGTTGTGACTGAGAAACTTGGAGATGCTCTTAAGGTTAAAGCAGGCACTAAAGCGCTCAAGAAGCCTCGATTCAGGATTGAAGACAGAATTCACTTGTTAGAACTTGGTGTTGGGATGTACCTCTTCTTTATTGGTTGGTACGATGTTATGTTCGGGAAAAACCACTACTTCATCTTTCTCTTTATCCAAGCATTCGCCTTCTTCATCATGGCATTTGGATATATTGGAACATTCGTTCCGAACTCCTAG 1608 0.3918 MDHFSSTTTSTIPFALQGAKDDITMQISLIWSQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGVVITLVKLFGRKPEKRYKWEPIKDDIELGNSCYPMVVVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDFVAIFDADFQPEPDFLWRTVPFMVHNSELGLIQARWKFVNADECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVTLWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRAKATVVGLLETSRVNEWVVTEKLGDALKVKAGTKALKKPRFRIEDRIHLLELGVGMYLFFIGWYDVMFGKNHYFIFLFIQAFAFFIMAFGYIGTFVPNS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0786 535 Pfam Glycosyltransferase like family 2 100 334 - -
Tpr6g0786 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 92 314 IPR029044 -
Tpr6g0786 535 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 534 - -
Tpr6g0786 535 PANTHER - 1 534 - -
Tpr6g0786 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 98 377 IPR029044 -
Tpr6g0786 535 CDD CESA_CaSu_A2 99 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0786 Tpr-Chr6 6668731 6675798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0786 8 534 Miscellaneous Gene Families AT5G03760 81.061 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0786 K13680 - gmx:100782772 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0786 6 6668731 6675798 Tpr1g4179 1 48332360 48341011 ECH
Tpr6g0786 6 6668731 6675798 Tpr6g0786 6 6668731 6675798 ECH
Tpr6g0786 6 6668731 6675798 Tpr1g4221 1 48998196 49090785 PCT