Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4221 ATGTTCTTTATGGAGGCATTTCAAGTAGCAAGTGAAGGAGTTGTCATGCAACTTGAGTTTGTTTGGAAGCATATGAGAGAAGGTTTGGTCGTACCAATACTGACAGTGGCAGTGTTTCTGTGCCTATGCATGTTATTGATGGATTTTGCTGAGAAAGTTTTCATGGGAGTTGTCATTTGTTTTGTGAAGTTGTGTGGTAGAAAACCAGAGAAGCGTTATAAATGGGAGACTATTAAGGATGATGTTGAATTGGGTAACTCTAATTATCCAATGGTTCTTGTCCAAATTCCAATGTACAATGAAGGAGAGGTTTATCAACTATCAATTGGTGCTGCATGTGGACTCTCATGGCCTTCTCATAGAATCATCATACAAATCCTTGATGATTCAACTGACCCAACAATCAAGGAGTTGGTGCAAGTGGAATGCCGTAAATGGGAAAGCAAAGGTGTTAACATAAAATATGAAGTGAGGGACAACAGAGATGGGTACAAAGCAGGAGCTTTAAAGGAGGGAATAAAGCATAGCTATGTCATGCAATGTGATTATGTTGCCATCTTTGATGCTGATTTTCAACCAGAACCTGATTTTCTCTACCAAACCATCCCTTTCCTTGTCAATAATCCTGAAATTGGTCTTGTTCAAGCTCGCTGGAAATTTGTGAATGCGGGTGAATGTTTGATGACAAGGATGCAACAGATGTCACTTGATTACCATTTTAAGGTTGAACAAGAAGTGGGGTCTTTCACTTATGCTTTCTTTGGCTTCAACGGAACTGCGGGTGTGTGGAGAATTTCGGCACTAAATGAAGCCGGTGGGTGGAAAGATAGGACCACAGTGGAAGATATGGATTTGGCTGTACGTGCTAGTCTCAAAGGATGGAAATTCTTATTTCTGTCCCACGTACAGGTCAAAAGCGAATTGCCAAGTACTTTAAAGGCCTATAGGTACCAACAACACAGATGGTCATGTGGGCCGGCCAATCTTTTCAGGAAAGTAGTTATCGAGATTTTCACAAATAAGAAAGTGTCTTTATGGAAGAAGTTCCACGTTGTTTATAGTTTTTTCTTTGTTGCGAAGATTGTGGTCCACATAAACACATTTATGTTTTATTGCATTGTGTTACCTGCAACTGTTATGGTGCCTGAGGTTGTTGTCCCTAAATGGAGTTGTGTTTATATCCCTTGCATGGTCACCCTTTTGAAAGCTGTTGGAACTCCAAGGTCATTCTATTTACTTGTATTTTGGGTTCTCTTTGAAAATACCATGTCTCTACATCGAACAAAGGCAACAATTATTGGTCTACTAGAGGCTACTAGAGTGAATGAATGGGTTGTCACAGAAAAGCTTGGAGATGCGCTTAAGGATAAAGTTGGTGGTACTAAAGTACTCAACAAACATCGATTTAACATTGGAGACAGGATTCACGTGACGGAACTTGTTGTTGGATTCTATCTCATATTTTGTGGCTGCTATGATTTTATGTATGGGAAAAATTACTTCTTCATATTCCTATTCATGCAAGCGGTTGCTTTCTTCATCCTGGCATTGGGATATGTTGGCACTTTTGTTCCCAACTCCTAG 1584 0.399 MFFMEAFQVASEGVVMQLEFVWKHMREGLVVPILTVAVFLCLCMLLMDFAEKVFMGVVICFVKLCGRKPEKRYKWETIKDDVELGNSNYPMVLVQIPMYNEGEVYQLSIGAACGLSWPSHRIIIQILDDSTDPTIKELVQVECRKWESKGVNIKYEVRDNRDGYKAGALKEGIKHSYVMQCDYVAIFDADFQPEPDFLYQTIPFLVNNPEIGLVQARWKFVNAGECLMTRMQQMSLDYHFKVEQEVGSFTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLFLSHVQVKSELPSTLKAYRYQQHRWSCGPANLFRKVVIEIFTNKKVSLWKKFHVVYSFFFVAKIVVHINTFMFYCIVLPATVMVPEVVVPKWSCVYIPCMVTLLKAVGTPRSFYLLVFWVLFENTMSLHRTKATIIGLLEATRVNEWVVTEKLGDALKDKVGGTKVLNKHRFNIGDRIHVTELVVGFYLIFCGCYDFMYGKNYFFIFLFMQAVAFFILALGYVGTFVPNS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4221 527 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 81 309 IPR029044 -
Tpr1g4221 527 PANTHER - 4 526 - -
Tpr1g4221 527 SUPERFAMILY Nucleotide-diphospho-sugar transferases 87 369 IPR029044 -
Tpr1g4221 527 Pfam Glycosyl transferase family group 2 183 389 IPR001173 -
Tpr1g4221 527 CDD CESA_CaSu_A2 90 326 - -
Tpr1g4221 527 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 4 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4221 Tpr-Chr1 48998196 49090785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4221 5 526 Miscellaneous Gene Families AT5G03760 70.690 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4221 K13680 - gmx:100782772 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0786 6 6668731 6675798 Tpr1g4221 1 48998196 49090785 PCT