Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0765 ATGAGTGAACAACAAAGTAACAGCAACAATCAATTGGTAGTTCAGAATTCAGGAAGTTTAAGCTTCAGTAGTCATTTGTCTAAGGAAGATGAAGAGATGTCAAAGTCTGCTCTTTCAACTTTTAGGGCTAAAGAAGAAGAAATTGAAAAGAAGAAGTTGGAAGTTAGAGAGAAGGTTCAGTTTCAGTTAGGTCGTGTTGAAGAAGAAACCAAACGTCTTGCAACAATTCGTGAGGAATTTCAGGAGCTTGAAGCACTTGCAGATCCAATGAGGAAGGAAGTTTCAGTTGTTAGAAAGAGGATTGATTCAATAAACAAAGAATTAAAGCCACTTGGTCATAACTGCCAGAAGAAGGAGAAAGAATACAAAGATGCTCTTGAAGCTTTTAATGAAAAGAATAGGGAAAAAGTACAGCTAATTACTAAATTAATGGAGCTGGTGAGCGAAAGCGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATTCAATGCAAATGCAATGA 516 0.3702 MSEQQSNSNNQLVVQNSGSLSFSSHLSKEDEEMSKSALSTFRAKEEEIEKKKLEVREKVQFQLGRVEEETKRLATIREEFQELEALADPMRKEVSVVRKRIDSINKELKPLGHNCQKKEKEYKDALEAFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNIDSMQMQ* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0765 171 MobiDBLite consensus disorder prediction 1 24 - -
Tpr6g0765 171 MobiDBLite consensus disorder prediction 1 41 - -
Tpr6g0765 171 Pfam Transcriptional activator 15 167 IPR007033 -
Tpr6g0765 171 Coils Coil 66 86 - -
Tpr6g0765 171 PANTHER EXPRESSED PROTEIN 10 168 - -
Tpr6g0765 171 PANTHER RAB6-INTERACTING PROTEIN GORAB 10 168 IPR007033 -
Tpr6g0765 171 MobiDBLite consensus disorder prediction 25 41 - -
Tpr6g0765 171 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0765 Tpr-Chr6 6377305 6379772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0765 - - gmx:100527015 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0765 6 6377305 6379772 Tpr1g1094 1 9832181 9833555 ECH
Tpr6g0765 6 6377305 6379772 Tpr6g0765 6 6377305 6379772 ECH
Tpr6g0765 6 6377305 6379772 Tpr7g3819 7 47297859 47300771 ECH