Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1094 ATGTGTCTAATTTGTAGAAAGAGAGGCAAAATGCAGAAAATGAAGAACCTTGGAAGTATTGGAAGCAGTGGGAGATTTTCAACAGAAGAATGTGAAGATGAGGATGTTTCGAAGCTGGCCATTTCGACATTTCAAGCTAAGGAAGAAGAGATTGAGAGGAGAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGCGCTGAAGAAGAGACGAGGCGTTTGGCTCACATTTGGGAAGAGCTTGAAGTTATGGAAGATCCTATGAGAAAGGAAGTTGCAATGGTACGTAAGAAGATTGACTTGGCTAACAAAGATTTAAAGCAACTCGGACAGAATTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTAGATACTTTCAACGACAAGAACAAAGAGAAGAATCATTTGGTAGCGACGCTAACTGAGATGCTGACAGAAAGTGAAAGAATGAGGATCAAGAAACTGGAGGAGCTATGCAAGACCATAGAGTCTGTGTCACTAAAACAATAA 519 0.4027 MCLICRKRGKMQKMKNLGSIGSSGRFSTEECEDEDVSKLAISTFQAKEEEIERRKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLANKDLKQLGQNYQKKEKEYKEALDTFNDKNKEKNHLVATLTEMLTESERMRIKKLEELCKTIESVSLKQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1094 172 Pfam Transcriptional activator 15 167 IPR007033 -
Tpr1g1094 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
Tpr1g1094 172 Coils Coil 94 135 - -
Tpr1g1094 172 Coils Coil 41 61 - -
Tpr1g1094 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1094 Tpr-Chr1 9832181 9833555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1094 - - gmx:100794044 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0765 6 6377305 6379772 Tpr1g1094 1 9832181 9833555 ECH
Tpr1g1094 1 9832181 9833555 Tpr1g1094 1 9832181 9833555 ECH