Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3819 ATGGCAACACCAAAAAGATCCTATGATCAACAACATCAACAAGTGAAGAACTCAGGAATGATTAGCAACATGCAAAGTCCAAGAAGAGATGAAAGGGAAGAGGAAATGTCAAGATCAGTTCTAGCAATGTTCAAATCAAAGGAAGAAGAAATTGAGAGGAGAAAATTGGAGGTTAGAGATAAGGTTCATGCTCATCTCGGTCGAGTCGAAAAGGAAACACAGCGATTGGCTGAGATAAGACAAGAGATTGAGGGATTCACAGATCCAATGAGGAAGGATGTTGCAATGGTTAGAAAGAAGATAGACATGGTTAACAAAGAGTTGAAGCCATTGGGTCAAACATGCCAGAAAAAGGAGAGAGAATACAATGAAGCTCTTGAGGCTTTCAATGAGAAAAACAAAGAAAAGGCTCAACTTGTTACAAAATTAGTGGAGCTTGTGACTGAAAGTGAGAGAATAAGGATGAAGAAGCTGGAAGATCTAAGCAAAAATATAGATACACTTCACTAA 510 0.3843 MATPKRSYDQQHQQVKNSGMISNMQSPRRDEREEEMSRSVLAMFKSKEEEIERRKLEVRDKVHAHLGRVEKETQRLAEIRQEIEGFTDPMRKDVAMVRKKIDMVNKELKPLGQTCQKKEREYNEALEAFNEKNKEKAQLVTKLVELVTESERIRMKKLEDLSKNIDTLH* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3819 169 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g3819 169 Coils Coil 115 135 - -
Tpr7g3819 169 MobiDBLite consensus disorder prediction 1 37 - -
Tpr7g3819 169 Pfam Transcriptional activator 16 167 IPR007033 -
Tpr7g3819 169 PANTHER - 9 168 - -
Tpr7g3819 169 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 168 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3819 Tpr-Chr7 47297859 47300771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3819 - - gmx:100796368 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3819 7 47297859 47300771 Tpr7g3819 7 47297859 47300771 ECH
Tpr6g0765 6 6377305 6379772 Tpr7g3819 7 47297859 47300771 ECH