Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4247 ATGGGGTCTAATTCATGGGAGGAGGCAATGCCAGGCTCCACAGGGGAGGAGAGAATTCTTGTTTCTGTTCGTGTGCGACCGCTGAATGATAAGGAGCTAGCAAGAAATGATCTGTCTGAATGGGAATGCATTAATGACACTACCATTGTGTACAGAAGCAACCTTTCAGCTTCTGAAAGGTCTCTGTATCCAACAAGCTATTCATTTGACAGAGTTTTTAGGACTGATTGCCCCACAAGGCAGGTGTACGAAGAAGCATCTAAGGAGGTAGCTCTTTCTGTTCTCAATGGCATCAACTCTAGCATTTTTGCATATGGACAAACAAGCAGCGGAAAAACATACACCATGAGTGGTATAACTGAGTATGCTGTAGCTGACATTTTTAATTACATAGAAAAGCACAAAGAAAGGGAGTTTGTCTTGAAGTTTTCAGCGATGGAGATCTATAATGAATCTGTCAGGGACCTCCTTAGTAACGACACTACACCTCTCCGACTTCTTGATGATCCAGAGAAAGGCACAGTTGTTGAGAAACTCACCGAGGAAACTTTGGAAGACTGGAACCATTTTACAGATCTTATTTCTTTCTGTGAAACACAACGGCAGATAGGAGAGACATCCTTGAATGAAGTAAGCTCTAGATCACATCAAATTCTAAGACTGACAATTGAAAGTTCTGCACGTGAATTTCTGGGAAATTATAAATCGAGCTCTCTTGCCGCTTCTGTGAATTTTGTTGATCTTGCTGGAAGTGAGCGGGCATCACAAACTAATTCAGCTGGTACGAGGTTGAAAGAGGGATGCCACATAAACCGCAGTTTACTGACTCTGGGAACTGTCATCCGTAAACTCAGCAAGGGGGGACGAAATGGACACATCCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCAATAGGAGGAAATGCTAGAACAGCAATCATCTGTACCATGAGTCCTGCACGGAGCTATGTTGAACAAACCAGAAACACCCTCTTATTTGCAAGTTGTGCAAAAGAAGTGTCAACTAATGCAAGAGTCAATGTAGTGATTTCTGATAAATTGTTGGTCAAACAATTGCAAAGAGAGTTGGCTCGGCTGGAAGCTGAGCTGAGAAATTCAGGGTCAAACCGCCGTAAAGCTGATTCTGCAGAATTGCTGAGGGAAAAAGACCTCCAAATTGAGATGTTAAAGAAAGAGATATTGGATCTGGCTTTGCAACGGGACCTTGCCCACTCTCAAATTAAGGACATGCTTCAAGTGGTGGGAGACGATATGTCCTCAAGTGATTTGGATAGTTTGGGTCCTCAGTATCCCAAACTACGTGTACGAAATTCTATGGACTTAGATAGTCTAATAGACGAACCAAATTTATTAAATTTTGACGCCATTGAGAGTGTTAGATCTTTTGATGCTTCTCAATATTCAGATGGACATAGTGTTAGTTCCGAAGATAACTATTTCCAGCTCCCTGATTTGGAAAAAAGTCTTCCCATCAGGAATTCTTTTCAAGGGGTGTCAATTGTAAGTCATGATGCTGTAACGAATGATTCGGATCAGGAGATAGTTCAAGAACAGCCCGATAATAAATTAGGCGACATCTGTCAGAAAGTTCGGTGCCCTGTTTCAGAAGATCCAATTACAAACACAGATTCGCACTCAAATCCAGCAGGTTTGAGTACAAATAAAGACACAGACTCGAATGCGTCATCTCCGAGGGCAAATACGGCTGTCTCAGGGTTGATAGAAGTTGATAACATAGACAAAGAAAATCAAGACTTGTTCTCATCTCCAGCGGAGAATACGGCTGTCTCAGGATTGACAGAAGTTGATGAGATAGACAAAGAAAATCAAGACTTGTTCTCATCTCCGGGGGAAAATACAGCTGTCTCAGGATTGACAGAAGTTGATAATATTGACAAAAAAAATCAGGACTCGTGTTCATTACGGTTAAAGGAAAACAAAGAATTGAATCTGTTGCACCGAGATTTTGTTCTACCCTCTATAGAGAAAATAAAGCCATGGCTGGTAGAAAAAAAGCCAACTAGTTCTAGAATCTTGAAATTGACAAGAAGCAGAAGCTGTAAAGCAAGTCTCATGAAGGATTCATCTTCAGATTGGTTTGACCAGGAAGAAATAATTCAGAACACCCCCCCAATAGGAATCCAAAAAGACCACATTGGAAGACCTAAGGATTTTGAAAGGAAGACCTGTACACTAAATTATAATCCCAATGGTGAGAGGTTATCCTGGGCTGGTTATGGGAATTGTGAGAGATGTTCTGCTGTTGACACGCAGAACGTGAAATCATCGTTTGATATGGAAATTGATGATGACAGTGATTTATCTCCAGTAAGAAAGGAAAAGAAAGAACGTGGAAGTTCAAATCCACCGGTGAATCATGAGGTTGCTCCCAAAAAGTTCAAAAACATTGGGTCGAACACATTACAATCTGATGAAAAAAAGCATTTGGAAGAAAAACATTTGGAATGGTCTTCAGAATTTAAGCGGCTGCAGAAAGAGATTATTGAACTCTGGCATTCATGTAATGTTTCATTGGTCCACAGGACTTACTTTTTCCTTTTATTCAAAGGGGAACCCTCAGATTCTATCTATATGGAGGTAGAGCGGAGAAGGTTGTCCTATCTCAAAGATAATCAAATTTTAGAAGATGGACGGACCCTTACCCCTGAATCAAGCAAGAGATATCTTCGAAGAGAGAGACAAATGTTGAGCAAGCAAATGCAGAAGAAGTTATCAAAATCTGAAAGAGAGAACTTGTATTTGAAGTGGGGTATTAGTATGAGTTCAAAGCATAGGGGGTTGCAATTGGCTCATCGCCTATGGTCCGAAACAGAAGATATAAACCACGTTAGAGAGAGTGCTACCATTGTTGCAAAGCTGGTTGGTACAGTTGAGCCAGATCATGCTTTCAAGGAGATGTTTGGCCTCAACTTCGCACCACGTCGCAGAATAAAGAAATCTTTCGGTTGGACGACTAGTATGAAGCAGATTTTGTGA 3027 0.4113 MGSNSWEEAMPGSTGEERILVSVRVRPLNDKELARNDLSEWECINDTTIVYRSNLSASERSLYPTSYSFDRVFRTDCPTRQVYEEASKEVALSVLNGINSSIFAYGQTSSGKTYTMSGITEYAVADIFNYIEKHKEREFVLKFSAMEIYNESVRDLLSNDTTPLRLLDDPEKGTVVEKLTEETLEDWNHFTDLISFCETQRQIGETSLNEVSSRSHQILRLTIESSAREFLGNYKSSSLAASVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGGRNGHIPFRDSKLTRILQSSIGGNARTAIICTMSPARSYVEQTRNTLLFASCAKEVSTNARVNVVISDKLLVKQLQRELARLEAELRNSGSNRRKADSAELLREKDLQIEMLKKEILDLALQRDLAHSQIKDMLQVVGDDMSSSDLDSLGPQYPKLRVRNSMDLDSLIDEPNLLNFDAIESVRSFDASQYSDGHSVSSEDNYFQLPDLEKSLPIRNSFQGVSIVSHDAVTNDSDQEIVQEQPDNKLGDICQKVRCPVSEDPITNTDSHSNPAGLSTNKDTDSNASSPRANTAVSGLIEVDNIDKENQDLFSSPAENTAVSGLTEVDEIDKENQDLFSSPGENTAVSGLTEVDNIDKKNQDSCSLRLKENKELNLLHRDFVLPSIEKIKPWLVEKKPTSSRILKLTRSRSCKASLMKDSSSDWFDQEEIIQNTPPIGIQKDHIGRPKDFERKTCTLNYNPNGERLSWAGYGNCERCSAVDTQNVKSSFDMEIDDDSDLSPVRKEKKERGSSNPPVNHEVAPKKFKNIGSNTLQSDEKKHLEEKHLEWSSEFKRLQKEIIELWHSCNVSLVHRTYFFLLFKGEPSDSIYMEVERRRLSYLKDNQILEDGRTLTPESSKRYLRRERQMLSKQMQKKLSKSERENLYLKWGISMSSKHRGLQLAHRLWSETEDINHVRESATIVAKLVGTVEPDHAFKEMFGLNFAPRRRIKKSFGWTTSMKQIL* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4247 1008 MobiDBLite consensus disorder prediction 775 798 - -
Tpr4g4247 1008 Pfam Kinesin motor domain 24 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 3 600 - -
Tpr4g4247 1008 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 629 1008 - -
Tpr4g4247 1008 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 PRINTS Kinesin heavy chain signature 206 223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 PRINTS Kinesin heavy chain signature 242 260 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 PANTHER CENTROMERE PROTEIN E 3 600 - -
Tpr4g4247 1008 PANTHER CENTROMERE PROTEIN E 629 1008 - -
Tpr4g4247 1008 CDD KISc_CENP_E 19 343 - -
Tpr4g4247 1008 Coils Coil 352 379 - -
Tpr4g4247 1008 Coils Coil 823 843 - -
Tpr4g4247 1008 Gene3D Kinesin motor domain 12 374 IPR036961 -
Tpr4g4247 1008 Coils Coil 389 409 - -
Tpr4g4247 1008 MobiDBLite consensus disorder prediction 547 577 - -
Tpr4g4247 1008 MobiDBLite consensus disorder prediction 775 821 - -
Tpr4g4247 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 376 IPR027417 -
Tpr4g4247 1008 SMART kinesin_4 16 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 ProSiteProfiles Kinesin motor domain profile. 18 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4247 1008 Pfam Domain of unknown function (DUF3490) 836 990 IPR021881 -
Tpr4g4247 1008 ProSitePatterns Kinesin motor domain signature. 241 252 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4247 Tpr-Chr4 49617012 49624899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4247 16 403 Miscellaneous Gene Families AT5G06670 41.162 4.24e-80 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4247 K11498 - gmx:100775190 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1073 2 12578699 12585153 Tpr4g4247 4 49617012 49624899 ECH
Tpr7g0256 7 2090085 2098515 Tpr4g4247 4 49617012 49624899 ECH
Tpr4g4247 4 49617012 49624899 Tpr4g4247 4 49617012 49624899 ECH
Tpr3g2392 3 22712477 22718956 Tpr4g4247 4 49617012 49624899 ECH
Tpr2g1073 2 12578699 12585153 Tpr4g4247 4 49617012 49624899 PCT