Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2392 ATGGGAGCTATTGCTGGTGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTGATGAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAGTGAGAAGGAAATTTCTGCTAATGAATCTGCTGATTGGGAATGTATTAATGATACTACTATCTTGTATCGGAATACGTTGCGCGAGGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGAGGTGACTGTGATACAAAGCAGGTATATGAGGAAGGAGCTAAAGAAATCGCTCTTTCAGTTGTCAGTGGAATTAACTCAAGTATTTTTGCTTATGGGCAAACGAGCAGTGGAAAGACATATACTATGGTTGGAATAACTGAATTTGCTGTATCAGATATTTTCGACTATATAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAAATTTACAATGAAGTTGTTAGAGACCTTCTCAGCGCTGACAACACTCCACTTAGGTTGCGCGATGATCCTGAGAGAGGACCCGTTTTAGAGAAACTCACAGAGGAGACTCTACAGGACTGGGATCATTTTCAAAATCTCCTATCCTTTTGTGAAGATCAGAGACAAGTAGGAGAGACATATCTGAATGAAAGGAGTTCAAGATCTCATCAAATTATCAGATTGACAATGGAAAGTTCTGCTAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGAAGTGAGCGTGCATCTCAGGTATCGTCAGCTGGGGTGAGATTGAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTTCAACCGTCATTCGTAAGCTCAGTAAGGGAAGACAAGGACACGTCAACTACAGAGATTCTAAGTTGACCCGCATACTGCAGCCTTGCTTAGGTGGAAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCCGCGCGAAGTCATGTTGAGCAAACTAGAAACACACTTCTTTTCGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTAGCTAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAATTGTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAAGAGATTAGGGAGCTAACTAAGCAACGCGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCTCATGGTGGGAAAGGAGCAGGCATCTAAAAAAGAAGAAGAAGATGCATGGGATGATGACTGTTCAGTATCATCAGAATCATCAAGCATTTGTGGTCCCAACGTACGCATTCGAGAGTTCAACAATCCTCACTATAATGGTGGAGGCAGTGGAAGTAATGAAGATGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTAGAGTTGGAGGAGTCAAGTAGAGACAACTCATCGCTAAGTGAAAATGGGGATTCAGCTTTGACAGTATCTGGAGGGGAAAATGGTACAAGCCAGGAAGTATCTTCACATTTGAATGAAGATGATGAACAATCTCTACGTGCCATGTCAGGAAATATGTCAAATTATAGGAATCTCAAATTGACTAGAAGCTGGAGTTGTTCAGAGTCTCGCATGGCTGGTTCTCCTGAGATAGGAGAAATAGAGAGGACACCAGCCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTGTGGAAAAAGTTCAATCCATTAAATTTCGATGGTTCGACAAGATTTTCAAGGAACGATTCTGAGTTAAGTCAGTCGTCAGTGGATGACCTTAGAGGCACCAGCAAGAGAACATCTGGCGATGAGGATATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGAGTCAGAAGGGCAACTAGTGAAGCTAGTGAGGAATGTGAAAGATGTAGGAGTGGATCCAATGCAGGAGGCACCAGAAACTCATTTAGACTGGTCTCTGAAGTTCAAGAGACAGCAGAAAGAGATAGTTGAACTGTGGCAATCTTGCTATGTACCATTAACACACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTAAGTTTCCTAAAAGAAACATTCTTTGATGAAAATCAGTCTGCGAAAGACAGCCAGACAATCTCATTAACTTCAAGTGTGAAAGCGCTTCGGCGGGAGAGAGAAATGCTGGTGAAGCTTATGCAGAAGAGGTTTTCTGAGGAAGAGAGGAAAAGGCTATTCACAGAATGGGGTATTCGGTTGAATTCAAAGCGCAGGAGGATGCAGCTAGCAGACCGTTTATGGACCAGCACTGACATGAACCATGTAATGCAGAGTGCTGAAATAGTTGCGAGGTTAGTAAGGTTTTCAGAGCAGGGACGCCCTCAAGGAGATGTTTGGGCTCAGCTTCACACCTCAACTCCAACTCACACGGCGGAGAAATTCATGGAAAAATAG 2592 0.4217 MGAIAGEELSKWEKMNGVMSGCEEKILVLLRLRPLSEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCDTKQVYEEGAKEIALSVVSGINSSIFAYGQTSSGKTYTMVGITEFAVSDIFDYIKRHEERAFALKFSAIEIYNEVVRDLLSADNTPLRLRDDPERGPVLEKLTEETLQDWDHFQNLLSFCEDQRQVGETYLNERSSRSHQIIRLTMESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRQGHVNYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNCDYVALLRKKDQQIEKMDKEIRELTKQRDLAESRIEDLLLMVGKEQASKKEEEDAWDDDCSVSSESSSICGPNVRIREFNNPHYNGGGSGSNEDEDLDEYCKEVRCVELEESSRDNSSLSENGDSALTVSGGENGTSQEVSSHLNEDDEQSLRAMSGNMSNYRNLKLTRSWSCSESRMAGSPEIGEIERTPANGFEKGFPGRPDGLWKKFNPLNFDGSTRFSRNDSELSQSSVDDLRGTSKRTSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQESEGQLVKLVRNVKDVGVDPMQEAPETHLDWSLKFKRQQKEIVELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLSFLKETFFDENQSAKDSQTISLTSSVKALRREREMLVKLMQKRFSEEERKRLFTEWGIRLNSKRRRMQLADRLWTSTDMNHVMQSAEIVARLVRFSEQGRPQGDVWAQLHTSTPTHTAEKFMEK* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2392 863 PANTHER CENTROMERE PROTEIN E 6 841 - -
Tpr3g2392 863 CDD KISc_CENP_E 25 347 - -
Tpr3g2392 863 Pfam Domain of unknown function (DUF3490) 693 841 IPR021881 -
Tpr3g2392 863 SMART kinesin_4 23 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 ProSiteProfiles Kinesin motor domain profile. 25 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 MobiDBLite consensus disorder prediction 602 622 - -
Tpr3g2392 863 MobiDBLite consensus disorder prediction 430 459 - -
Tpr3g2392 863 Pfam Kinesin motor domain 31 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2392 863 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 841 - -
Tpr3g2392 863 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr3g2392 863 MobiDBLite consensus disorder prediction 602 629 - -
Tpr3g2392 863 Gene3D Kinesin motor domain 19 377 IPR036961 -
Tpr3g2392 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 379 IPR027417 -
Tpr3g2392 863 MobiDBLite consensus disorder prediction 496 534 - -
Tpr3g2392 863 Coils Coil 391 425 - -
Tpr3g2392 863 Coils Coil 356 376 - -
Tpr3g2392 863 MobiDBLite consensus disorder prediction 502 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2392 Tpr-Chr3 22712477 22718956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2392 22 439 Miscellaneous Gene Families AT5G06670 38.679 9.15e-80 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2392 K11498 - gmx:100820012 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2392 3 22712477 22718956 Tpr3g2392 3 22712477 22718956 ECH
Tpr3g2392 3 22712477 22718956 Tpr2g1073 2 12578699 12585153 ECH
Tpr3g2392 3 22712477 22718956 Tpr4g4247 4 49617012 49624899 ECH