Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1073 ATGGGTTCTGTTGGAGGAGAAGAGGCAATTGAAGAAGCTGGAAAAAATCATGAAGAAAGAATTCGAGTTTCGGTTCGAATTCGGCCTTTAAATGATAAGGAAATTGCAAGAAATGATGTATCTGATTGGGAATGTATCAATGATACTACAATTATATATAGAAATAACATTTCAGTTTCTGAAAGATCTTTATATCCTACTGCATATTCATTTGATAGAGTATTTAGATCAGATTGTGGAACAAGGGAGGTGTATGAAGCAGCAGCCAAAGAAGTTGCTCTTTCTGTTGTTAGTGGAATCAATTCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGTAAAACATACACCATGAGTGGTATAACTGAATGCACTGTAGCTGATATTTTTAACTACATTGAGAAGCACATGGAGAGAGAATTCATGTTGAAGTTTTCAGCAATTGAGATTTATAATGAATCTGTCAGGGATCTTCTTAGTCCAGATTGTATTCCTCTTCGACTTCTTGATGATCCAGAGAGGGGGACAGTTGTTGAGAGACTTACTGAGGAAACTATAACAGATTGGAACCATTTTACCGAACTTATTTCTTTTTGTGAAACACAAAGGCAGATAGGAGAGACATCACTGAATGAAGCAAGTTCTAGATCTCATCAGATTCTTAAACTGACAGTTGAAAGTTCGGCACGCGAATTCCTTGGAAATGACAAGTGTAGCTCTCTTTCTGCTTCAGTGAACTTTGTTGATCTTGCTGGAAGTGAAAGGGCATCCCAAACCAATTCAGCTGGTGCCAGGTTGAAAGAAGGTTGCCACATAAACCGTAGTTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGTAAGGGAAGAAATGGACACATTCCTTTCAGAGATTCAAAGCTAACGCGCATATTGCAATCCTCATTAGGAGGCAATGCTAGAACTGCAATCATCTGTACCATGAGCCCTGCACGGAGCCACGCTGAACAAACCAGAAACACACTCTTATTTGCAAGCTGTGCTAAAGAAGTTGAAACTAATGCACAAGTCAATGTAGTGGTGTCTGATAAAGCACTAGTCAAACAATTACAAAAGCAGTTGGCTAAACTGGAAAGTGAATTGAGATATTCAGGATCATCCCGTCCTAATATTTCTGATTCTTCAGAATTGTTGAGAGAGAAAGATCAAGAAATTGAGATGTTAAAGAAAGAGGTAAGGGAGCTGACATTGCAGCGTGATCTTGCGCAAATTCAAATTAAGGACATGCTCCAAGAAGCTGGAGATAACGTGTCTTGTTTAATAGGAGTGGAGAGTTTAGTAGGTCCCCGGTATCCCAAACTGCGCGTGAGAAATACATGGAACTTTGAAAATCAAAGACAGGAACCGGAACCAGAACCAGAACCGGAACCAAATGTATTAAGTATTGACTGTGAAGAAAGTGTTAGGTCCTTTGATGCATCTCAATATTCAGATGGACATAGTATTAGTTCTGATGATAATTTGTTCCAACTCCCTGACCTTGAAAAGAATCTTATGGTTAGAAATTCTTCACCAAGGCTATCAGTTACAAGCATTAACAATGCTTTACAGAATGATTTGGATCAGAAAAACATTGAAGATCAGAATGAAGAGGACTATTGTAAAGAAGTTAGGTGCATTGAGATAGAAGAGCCTATCACAAACACACATGCACATACAAACTCAGAAGATTTAAGATCAAATACATATACTGATTCTAGTGCATCATCTCCTCATCAAGCAAAGACAGATATGTCAGGATTGATTGTAGTCGATGCTGAGAACAAAAACGATACAGATTTGTGCTCGTCGGTGTTAAAGGAAGACCATAGACTGATCAATATGCGCGAATATTTTGCTTTTCCGACTCCAGAAAATAGTACTCCTTGGATGATAGAAAGTAATAGAAGTAGTTCTAGTTGTAGATCTTTGAAGTTGAGCCGAAGTAGAAGTTGTAAAGCTGGTCTCATGAGGAATTTATCTTCCGATTGGTTTGAAGATGATGATGTGATTCAGAACACACCTCCTATAGGGAATGAAAAAGACTTTTCTGGAAGACCTGAGGGATTTCCGAGGAAGGTTCATACACTACATTATAATGCAAATGCAGAGAGGAATTCTATGGAAAATCCTGCTTCTGATGATGTACAGATTGTGAAATCATTCATTGACAAGGAAAGTGAGAGCAATGGTCCTTTAACTCCAAAAACAAAGGAAACAGAAAATCTTAAGAGACTGAATTTACTTGATGACCATGAGGTTCCTGGGACAGGATTGGAGGTCATCATGTCCGGAAAGAATGTCAAAGATATAGGTTTGGACCCAATGCAAACTGATGGAGAAAGTGATTCAGACTGGCCTTCAAAATTTAACAGGCTGCAAAAGGAGATTGTTGAACTCTGGGATGCTTGTAATATTTCCTTGGTTCACAGAACTTACTTTTTCCTTCTCTTCAAAGGGGATCCATTAGATTCTATTTATATGGAGGTAGAACACAGAAGGCTATCGTATCTTAAGCAAACTTTTTTACAAGGCAATAAGACTCTTGAAGATGGAAGAACACTTACCCCTGAGACAAGCATGAGATATCTCAAAAGAGAGAGGCAAATGTTGTGCAATCAAATGCAGAGGAAGCTATCTAAATCAGATAGAGAAAATTTATATTTGAAATGGGGCCTTCGTTTGAGTTCAAAGCATAGGAGGTTACAGTTGGCTCATCATTTATGGACTGACACAAACAACATGGATCACATTAGAGAGAGTGCAGAAGTTGTTGTAAAATTGGTTGGTCCAGTAGAGCCAGAACAAGCTCTTAAGGAAATGTTTGGCCTCAACTTTGCTCCAAGGCCCACAAGTAGGAAATCTTTTAGTTGGTCTTTTACTAACAGTATGAGGCAGATTTTGTGA 2925 0.3853 MGSVGGEEAIEEAGKNHEERIRVSVRIRPLNDKEIARNDVSDWECINDTTIIYRNNISVSERSLYPTAYSFDRVFRSDCGTREVYEAAAKEVALSVVSGINSSIFAYGQTSSGKTYTMSGITECTVADIFNYIEKHMEREFMLKFSAIEIYNESVRDLLSPDCIPLRLLDDPERGTVVERLTEETITDWNHFTELISFCETQRQIGETSLNEASSRSHQILKLTVESSAREFLGNDKCSSLSASVNFVDLAGSERASQTNSAGARLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHAEQTRNTLLFASCAKEVETNAQVNVVVSDKALVKQLQKQLAKLESELRYSGSSRPNISDSSELLREKDQEIEMLKKEVRELTLQRDLAQIQIKDMLQEAGDNVSCLIGVESLVGPRYPKLRVRNTWNFENQRQEPEPEPEPEPNVLSIDCEESVRSFDASQYSDGHSISSDDNLFQLPDLEKNLMVRNSSPRLSVTSINNALQNDLDQKNIEDQNEEDYCKEVRCIEIEEPITNTHAHTNSEDLRSNTYTDSSASSPHQAKTDMSGLIVVDAENKNDTDLCSSVLKEDHRLINMREYFAFPTPENSTPWMIESNRSSSSCRSLKLSRSRSCKAGLMRNLSSDWFEDDDVIQNTPPIGNEKDFSGRPEGFPRKVHTLHYNANAERNSMENPASDDVQIVKSFIDKESESNGPLTPKTKETENLKRLNLLDDHEVPGTGLEVIMSGKNVKDIGLDPMQTDGESDSDWPSKFNRLQKEIVELWDACNISLVHRTYFFLLFKGDPLDSIYMEVEHRRLSYLKQTFLQGNKTLEDGRTLTPETSMRYLKRERQMLCNQMQRKLSKSDRENLYLKWGLRLSSKHRRLQLAHHLWTDTNNMDHIRESAEVVVKLVGPVEPEQALKEMFGLNFAPRPTSRKSFSWSFTNSMRQIL* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1073 974 MobiDBLite consensus disorder prediction 561 588 - -
Tpr2g1073 974 PRINTS Kinesin heavy chain signature 99 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 PRINTS Kinesin heavy chain signature 208 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 16 974 - -
Tpr2g1073 974 Pfam Domain of unknown function (DUF3490) 795 954 IPR021881 -
Tpr2g1073 974 Coils Coil 384 425 - -
Tpr2g1073 974 ProSiteProfiles Kinesin motor domain profile. 20 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 SMART kinesin_4 18 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 Pfam Kinesin motor domain 26 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1073 974 CDD KISc_CENP_E 21 344 - -
Tpr2g1073 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 378 IPR027417 -
Tpr2g1073 974 PANTHER CENTROMERE PROTEIN E 16 974 - -
Tpr2g1073 974 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr2g1073 974 Coils Coil 353 373 - -
Tpr2g1073 974 Gene3D Kinesin motor domain 11 375 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1073 Tpr-Chr2 12578699 12585153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1073 18 374 Miscellaneous Gene Families AT5G06670 44.384 5.39e-87 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1073 K11498 - gmx:100809766 1388.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1073 2 12578699 12585153 Tpr4g4247 4 49617012 49624899 ECH
Tpr7g0256 7 2090085 2098515 Tpr2g1073 2 12578699 12585153 ECH
Tpr2g1073 2 12578699 12585153 Tpr2g1073 2 12578699 12585153 ECH
Tpr3g2392 3 22712477 22718956 Tpr2g1073 2 12578699 12585153 ECH
Tpr2g1073 2 12578699 12585153 Tpr4g4247 4 49617012 49624899 PCT