Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3662 ATGCTGATGATTACCGCTTGGATCACTGACCTCTTCGCTTGCATGGGTGGTTGTTTTGGATGCTGTGTGAAACCTACACCAATTATTGCTGTCGATGAGCCGGCCAAAGGACTAAGAATTCAGGGGCAGACAATGAGAAAACCATCCGCATCAGATGGATTCTGGAGTTCTAGCCCTTGTGATCTGGATAACAGCACAATTCAATCTCAACGAAGTATATCATCTGTCAGTACTTTAAATCAAATCCTGTATCAAAGCAGTGCAACTTCTACTGCAGGCACTGATCCTGAATTTGTAAACCAAGGTCTTCTTCTTTGGAATGAAAGCAGACTTCAGTGGGTTGGACGGGGCTTATCTGAGAAGCAAAGCCAACAAAAACAAGAATCCCGACTAAATCGGAATGCAACTTATGAAAGTTTGCTTGGAACTAGACAACCTTTCCCAAAGTCCGTACCTTTATCTGAAATGGTTGAATTCCTTGTGGATGTTTGGGAGAGTGAAGGAATGTATGGTTGA 516 0.4302 MLMITAWITDLFACMGGCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPSASDGFWSSSPCDLDNSTIQSQRSISSVSTLNQILYQSSATSTAGTDPEFVNQGLLLWNESRLQWVGRGLSEKQSQQKQESRLNRNATYESLLGTRQPFPKSVPLSEMVEFLVDVWESEGMYG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3662 171 PANTHER OS07G0479600 PROTEIN 3 170 - -
Tpr4g3662 171 Pfam Protein of unknown function (DUF4050) 134 170 IPR025124 -
Tpr4g3662 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
Tpr4g3662 171 PANTHER DUF4050 FAMILY PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3662 Tpr-Chr4 42549388 42552825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3662 - - mtr:MTR_4g114620 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3662 4 42549388 42552825 Tpr4g0543 4 5126448 5129466 ECH
Tpr4g3662 4 42549388 42552825 Tpr7g0638 7 5639877 5642939 ECH
Tpr4g3662 4 42549388 42552825 Tpr1g3396 1 38291281 38293796 ECH
Tpr4g3662 4 42549388 42552825 Tpr4g3662 4 42549388 42552825 ECH