Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0543 ATGCATATGGGTGGTTGTGTTGGATGCTATAAAAGGCCCGCACTAGTTACCACTGTGGAAGGACCATCAACAAAAGGGTTGACAAAACAAGGTAAGGCCGTGGAGAAACCTAGTACATCAGAAGATTTCTGGACTACAAGTACGCATGATATGGACAATAGTATTGTTCAATCACAAGGCAGTATATCTTCGACAAGTCTAAATAACCAAGCTGTAGCTCCTCATGGCAGTTCTTCGAACAACCCACCTGAATTTGTAAATCATGGTCTAATTTTATGGAACCAGACCCGGCAGCGTTGGGTTGGAAATAAAAAGCCTGAGAGTCGAACACAACAATTGCGAGAACCTAAATTGAGTTGGAATGCAACATACGAAAGTTTACTGACAAGCAACAAGCCATTCCGCCAGCCTATCCCTCTCGCTGAAATGGTAGATTTTCTTGTGGACGTTTGGGAACAGGATGGCCTGTATGACTGA 477 0.4361 MHMGGCVGCYKRPALVTTVEGPSTKGLTKQGKAVEKPSTSEDFWTTSTHDMDNSIVQSQGSISSTSLNNQAVAPHGSSSNNPPEFVNHGLILWNQTRQRWVGNKKPESRTQQLREPKLSWNATYESLLTSNKPFRQPIPLAEMVDFLVDVWEQDGLYD* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0543 158 MobiDBLite consensus disorder prediction 54 82 - -
Tpr4g0543 158 PANTHER DUF4050 FAMILY PROTEIN 3 158 - -
Tpr4g0543 158 Pfam Protein of unknown function (DUF4050) 117 158 IPR025124 -
Tpr4g0543 158 Pfam Protein of unknown function (DUF4050) 47 116 IPR025124 -
Tpr4g0543 158 PANTHER OS07G0479600 PROTEIN 3 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0543 Tpr-Chr4 5126448 5129466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0543 - - mtr:MTR_4g010330 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3662 4 42549388 42552825 Tpr4g0543 4 5126448 5129466 ECH
Tpr4g0543 4 5126448 5129466 Tpr4g0543 4 5126448 5129466 ECH