Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3396 ATGGAAAAATTCAAGCTTAAATGCAAAGGAATTTTCTCTAGCATAGGTTGTTGTCGAAGACGCGAAAAACCTCGAGCGAAAGTTTCAATGGATGAGGGATGTAAAATAGAAAGAATTGAAGGCCAAACAGTGACTATAGATGATGGATCATCAGATTTTTGGAGCAGCAGCACTTATGATAAGGATCATAGTGAAGCTCGGTCACGGAGAAGCGCTTCTTTGAGTGGAATAACAATGAATCCTTCTTCTGATCATCAAAGTAGTTCAAGCAGTAAAACTAGTCCTCCTGAATTTGTCAACCAAGGGCTTATTGTATGGAACCAGATAAGGCAACAATGGGGTGGAAATAAAAGACATGAGAGTCAGACAGTGGTTAGAGAACCAAGAATAAGTTCAGATGCTACTTATGAAGATCTGCTTGGGAACACAAAGCCTTTTCCACAACCTATCCCTCTAAGAGAAATGATTAACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTATATGATTAA 513 0.3899 MEKFKLKCKGIFSSIGCCRRREKPRAKVSMDEGCKIERIEGQTVTIDDGSSDFWSSSTYDKDHSEARSRRSASLSGITMNPSSDHQSSSSSKTSPPEFVNQGLIVWNQIRQQWGGNKRHESQTVVREPRISSDATYEDLLGNTKPFPQPIPLREMINFLVDIWEQEGLYD* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3396 170 PANTHER DUF4050 FAMILY PROTEIN 10 170 - -
Tpr1g3396 170 MobiDBLite consensus disorder prediction 46 97 - -
Tpr1g3396 170 PANTHER OS07G0479600 PROTEIN 10 170 - -
Tpr1g3396 170 MobiDBLite consensus disorder prediction 70 97 - -
Tpr1g3396 170 Pfam Protein of unknown function (DUF4050) 70 128 IPR025124 -
Tpr1g3396 170 Pfam Protein of unknown function (DUF4050) 133 170 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3396 Tpr-Chr1 38291281 38293796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3396 - - mtr:MTR_1g012480 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3396 1 38291281 38293796 Tpr1g3396 1 38291281 38293796 ECH
Tpr7g0638 7 5639877 5642939 Tpr1g3396 1 38291281 38293796 ECH
Tpr4g3662 4 42549388 42552825 Tpr1g3396 1 38291281 38293796 ECH