Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2476 ATGAAAGAATCAAGCAAAACATTCACAATATTACTAATCTCATCATGGTATTCATCAAACATTGGTGTATTACTCTTAAACAAATATCTTCTATCTAACTATGGTTTCAAATACCCAATTTTCTTAACCATGTGTCATATGACAGCATGTTCTTTATTCAGCTATATTGCAATTGCTTGGTTCAAAATGGTTCCAATGCAATTCATTCGTTCTAATCTTCAATTTATTAAAATTGCTACTTTGAGTTTGGTTTTCTGTGTTTCCGTCGTTTTTGGTAATATTTCCCTACGGTATCTACCTGTGTCGTTTAATCAAGCTGTTGGTGCTACTACTCCTTTTTTTACTGCCGTTTTTGCTTATCTTATGACGTTTAAGAGAGAAGCTTTTCTTACTTATCTTGCTCTTCTTCCTGTTGTTACTGGTGTTATCATTGCTAGTGGGGGCGAACCGAGCTTTCATTTGTTTGGATTCATAATATGTATTGCAGCTACAGCGGCACGAGCCCTAAAAACAGTGTTACAAGGAATTTTACTTTCTTCTGAAGGGGAGAAGCTGAATTCTATGAACCTTCTGCTGTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCTGCTGCACTTTATATGGAAGAAAATGTGGTTGGCATCACGTTGGCTCTTGCTAGAGATGATCCGAAGATCATTTGGTACCTTCTATTCAATTCCTCACTAGCATATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACACACCAGTGCTCTCACTCTTCAGGTACTTGGGAATGCAAAAGGAGCTGTAGCAGTTGTAGTTTCAATTCTGATATTTAAAAATCCAGTTTCAGTCACTGGAATGATGGGTTATTCACTCACAGTACTCGGAGTTATACTGTATAGTGAGGCCAAAAAGCGAAGCAAGTGA 921 0.3757 MKESSKTFTILLISSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYIAIAWFKMVPMQFIRSNLQFIKIATLSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAFLTYLALLPVVTGVIIASGGEPSFHLFGFIICIAATAARALKTVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPAALYMEENVVGITLALARDDPKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMMGYSLTVLGVILYSEAKKRSK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2476 306 PANTHER SOLUTE CARRIER FAMILY 35 5 305 - -
Tpr4g2476 306 Pfam Triose-phosphate Transporter family 10 299 IPR004853 -
Tpr4g2476 306 PANTHER - 5 305 - -
Tpr4g2476 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2476 Tpr-Chr4 26500736 26504733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2476 4 306 Organic Solute Cotransporters AT3G11320 87.459 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2476 - - gmx:100806704 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0896 7 8036589 8044941 Tpr4g2476 4 26500736 26504733 ECH
Tpr4g0787 4 7346570 7349314 Tpr4g2476 4 26500736 26504733 ECH
Tpr3g3787 3 42274113 42276247 Tpr4g2476 4 26500736 26504733 ECH
Tpr4g2476 4 26500736 26504733 Tpr4g2476 4 26500736 26504733 ECH