Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0787 ATGACCCAGATGATGAAAAACTCAATTCCATGGCCAACAATTATGGTGGTGATTTCTTGGTACAGTTCAAATATTGGGGTGCTTCTAATGAACAAGTACTTATTAAGCAACTATGGTTACAAGTTTCCTGTTTTTCTCACCATGTGTCACATGATGTTATGTTCTGTTTTCAGCTACGTTGGAATTTATGTTATGGATATTGTACCTTTGCAGAGTGTTCAATCTAAGAATCAGTTGTTCAAAATCTGCGGATTAAGTGTTGTTTTTTGTTTCTCAGTTGTTTGTGGGAACATTTCTCTTAATTATATTCCGGTGTCGTTTAATCAAGCTATTGGAGCTACTACACCTTTTTTCACTGCTATTTTTGCTTATTTTGTGAGTAGAAAAAGAGAAGCTTGGGTTACTTACGGTACCCTTTTGCCTGTTGTTACTGGTGTTATCATTGCTAGTGGGGCTGAACCAAGTTTTCATCTATTTGGATTTATAATCTGTGTTTCATCAACTGCTGCCAGAGCATTTAAATCAGTGCTTCAATCTATTTTGTTGTCCTCAGAAGGAGAAAAATTGGATTCTATGAACCTGCTGCTTTATATGGCACCTATAGCAATGATGGTGTTACTTCCTGCAACATTGTTGATGGAGGGAAACGTGCTTCGGATGACAATAGAGCTTGCCAGAGAGGATTTCAGAATTATTTGGTATCTGCTTTTGAGTTCATCTCTTGCATATTTTGTCAACCTCACTAATTTTTTGGTGACCAAATATACAAGTGCTCTTACCCTTCAGGTGTTAGGAAATGCAAAGGGTGCAGTTGCAGTGGTGATCTCAATTTTGATATTTCAAAATCCAATTTCAATGATAGGAATGCTTGGCTATGTACTCACTATCATTGGAGTTATATTGTATAGTGAAACCAAGAAGAGATATAGTACTTAG 936 0.3665 MTQMMKNSIPWPTIMVVISWYSSNIGVLLMNKYLLSNYGYKFPVFLTMCHMMLCSVFSYVGIYVMDIVPLQSVQSKNQLFKICGLSVVFCFSVVCGNISLNYIPVSFNQAIGATTPFFTAIFAYFVSRKREAWVTYGTLLPVVTGVIIASGAEPSFHLFGFIICVSSTAARAFKSVLQSILLSSEGEKLDSMNLLLYMAPIAMMVLLPATLLMEGNVLRMTIELAREDFRIIWYLLLSSSLAYFVNLTNFLVTKYTSALTLQVLGNAKGAVAVVISILIFQNPISMIGMLGYVLTIIGVILYSETKKRYST* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0787 311 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 6 310 - -
Tpr4g0787 311 Pfam Triose-phosphate Transporter family 15 303 IPR004853 -
Tpr4g0787 311 PANTHER SOLUTE CARRIER FAMILY 35 6 310 - -
Tpr4g0787 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 151 - -
Tpr4g0787 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 202 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0787 Tpr-Chr4 7346570 7349314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0787 13 308 Organic Solute Cotransporters AT3G11320 75.338 1.12e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0787 - - gmx:100799632 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0787 4 7346570 7349314 Tpr7g0896 7 8036589 8044941 ECH
Tpr4g0787 4 7346570 7349314 Tpr4g2476 4 26500736 26504733 ECH
Tpr4g0787 4 7346570 7349314 Tpr4g0787 4 7346570 7349314 ECH
Tpr4g0787 4 7346570 7349314 Tpr3g3787 3 42274113 42276247 ECH