Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3787 TTTGTTACAATGCCACCAGTATCTGGAAAACTATTCACCGTTAGTTTGATAAGTTTCTGGTATGCATCAAACATTGGAGTATTACTATTAAACAAGTACCTTTTAAGCAATTATGGTTTCAAGTATCCAATATTCTTAACATTGTGTCACATGATGGCATGTTCAATGCTAAGTTACATTGCAATTGCATGGATGAAAATGGTGCCATTGCAAACGGTAAGATCAAGGGTGCAATTTGTGAAGATATCGTCGCTTGGACTTATATTCTGTTTGTCTGTTGTTGGAGGGAATATTTCCCTAAGGTATCTTCCTGTTTCTTTTAATCAAGCTATTGGTGCTACGACGCCGTTTTTTACGGCGGTTTTTGCTTATGTTATGACCCTTAAGAGGGAAGGTTGGCTTACTTATATGGCTCTTGTTCCTGTTGTTACTGGTGTTATGATTGCTAGTGGGGGAGAACCAAGTTTTCATCTATTTGGATTTATAATGTGCGTCAGTGCTACAGCAGCCAGGGCACTCAAAACAGTCCTTCAAGGGGTCTTGCTGTCTTCTGAAGCGGAAAAGCTGAATTCTATGAACCTTCTTATGTACATGGCACCAGTGGCTGTTGCATTCCTTCTTCCTGCTTCAATTATAATGGAGGAAGATGTTCTTGGAATTACAATTCAACTTGCTAGAGAAGATTCAACTATTGTGTGGTTACTTCTATTCAACTCTACACTGGCATATTTTGTCAACTTGACCAATTTCTTAGTTACAAAGCACACCAGTGCATTAACACTTCAGGTCCTAGGAAATGCAAAAGGAGCTGTGGCAGTTGTTATCTCTATTTTGATATTTAGAAATCCTGTATCAGTAACTGGAATGTTAGGATATTCTCTTACAGTCATTGGAGTTATCCTATATAGTGAAGCCAAGAAGCGAAATAAAAGAGAAAGAGATACTTGA 948 0.3819 FVTMPPVSGKLFTVSLISFWYASNIGVLLLNKYLLSNYGFKYPIFLTLCHMMACSMLSYIAIAWMKMVPLQTVRSRVQFVKISSLGLIFCLSVVGGNISLRYLPVSFNQAIGATTPFFTAVFAYVMTLKREGWLTYMALVPVVTGVMIASGGEPSFHLFGFIMCVSATAARALKTVLQGVLLSSEAEKLNSMNLLMYMAPVAVAFLLPASIIMEEDVLGITIQLAREDSTIVWLLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMLGYSLTVIGVILYSEAKKRNKRERDT* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3787 315 Pfam Triose-phosphate Transporter family 15 303 IPR004853 -
Tpr3g3787 315 PANTHER - 9 309 - -
Tpr3g3787 315 PANTHER SOLUTE CARRIER FAMILY 35 9 309 - -
Tpr3g3787 315 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 152 - -
Tpr3g3787 315 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3787 Tpr-Chr3 42274113 42276247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3787 8 310 Organic Solute Cotransporters AT3G11320 82.508 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3787 - - gmx:100803533 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3787 3 42274113 42276247 Tpr3g3787 3 42274113 42276247 ECH
Tpr3g3787 3 42274113 42276247 Tpr7g0896 7 8036589 8044941 ECH
Tpr3g3787 3 42274113 42276247 Tpr4g2476 4 26500736 26504733 ECH
Tpr4g0787 4 7346570 7349314 Tpr3g3787 3 42274113 42276247 ECH