Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3735 ATGCCGACGCCGGTAAGCACAGCGAGGCAATGCTTAACAGACGAAGCAGCGCGTGCACTCGACGACGCAGTTTCAGTAGCGCGTAGACGATCCCACCCTCAAACAACATCTCTTCACGCCATCTCAGCCTTACTCTCTCTTCCCTCCAACTCACTACGCGACGCGTGTGCACGCGCCGGAACTTCACCATACTCACCTCGTCTTCAGTTCCGCGCCTTAGAACTCTCCGTCGGTGTTTCCCTCGACCGTCTCCCTACTTCCAAGTCCTCCGCCGTCTCCGACGGCGGAAACGGCGGACCTCCGGTTTCTAACTCTCTCATGGCAGCCATTAAACGCTCTCAGGCAAATCAACGTCGTCATCCAGATAGTTTCCATTTACTTCAAATAATGCAACAACAAAATCAACAAAATCAAACGGCGTCGTTTTTGAAAGTTGAATTGAAGCATTTCATTCTTTCGATTCTTGATGATCCTATTGTTAGTAGAGTTTTTGCTGAAGCAGGTTTTCGTAGCTATGATGTTAAATTCGCTTTACTTCAACCTCCTCCACCTTCTAGATTCTTCCATCGGTCTTCTACTCCGGTTTTTTTATGCAACATCGAACCAGTTGAACCGTTTCGGTTCGATGAGAATTCGAGAAGGATTGTTGAGGTTATTGCTGGAAAGAGTCAGGGGGTTAGTAAAAAGAATCCTCTTTTGATTGGGGTTTATGCTAAAACCGCTCTTAAAAGGTTTATTGAGTTAGTTCAAAGTGGAAAGATTGGTTTTTTACCTAAAGAGCTTGATGGGTTGAGTGTGATTTCTATTGAAAATGAGATTTTTGAGTTTGTTGTTGGTGGTGGAAGTGAGGAGAAGATGGGGTTAAGATTTGATGAAGTGGGTCGTTTAGTTGAGCAATGTTTGGGTGCTGGTGTTGTTGTTAGTTTTGGGGAGATTGAGGTTTTTGTGAAGATGAATGATGATGATGATTGTGTTAATGTTGTTGGTGATGTTGTTGTTTCACGGTTGACAAGGTTGTTGGAGGTTTATGGTGGGAAGATTTGGTTGATAGGTGTAGCGGGAAATTGTGAAGTGTTTTCTAAGTTTCTAAGGTTGTTTCCAACCGTTGATAAAGATTGGGATTTGCATCTTTTGACTGTGACATCTGCTACTCCTTCTATGGAAGGACTATACTCTAAATCCAGCTTGATGGGGTCCTTTGTTCCATTTGGTGGCTTCTTTTCAACACCATCTGATTTCAGAAATTCCATAAGTTGTACAAATTCATCCTCATCTTTAACTCTTTGTGACACATGCAATGAAAAGTATGAACAAGAAGTTGCTGATAATGTGAATGTAGTAGGACCATCTACTTCAGCATCAACAAATTTACCTTGGTTACAAAAAGTGAATGTAGATTCAGATAATAGAGGATTGAGTTTGGCAAAGACCAATGAAGATAATACAAGTTTGAATGCTAAGATCTCTGGATTGCAAAGGAAATGGAGTGATATCTGTCAACATCTTCATCAAAACAAATCATTACCTGAAATGAATGTTTCCCAAACATTATCAAGGTTCCAATCTCCATTCCACGAGGGGTTTCGATTTGGTCGAGGAACTAGCAATCTTAATGAAATCCACTGTTCAAATCCCATTCCCTACATGTCTAAAGAGTTACAAACTCCATTTCCATCCAAACAGATAATACCATTTTCACAACCTTTTGATACTAATCTTTGTGCCAAAGATAAAGCCGTACATGTACCAAAACTTTCAAAATTCGACACACAAAGTCCTCTGCTTGACCGCAAGTCATCTTCATCGCTTACTCCTGTCACCACAGATTTGGTTTTGGGAACTATGTATACATCGGTTACTCATGAGCCGGATACACCTAAACTAAATGATCATAAGAAGCATCTGCAGCATTTGTCGGATTCTCTTTCGACCGATTTTGATACTATGAATGAGAGTACTTCAAATCAAATTGCTAGATCATCTTCATACTCTGGTCCAAATTTAGACAGTCTATTTGAAATGGTTGATTTCAAGTCACTTTACAAACTTCTTACTGAAAAGGTTCCGCTGCAAGACGAGGCAATATATGCTATCATTAGAATTATGACACTTTGTAGATCTGGTGCCGGAAAGCATAGTCAATCGAATTCGAATGTTAGAGCAGACACGTGGTTTTCTTTCCTTGGACCAGATAGAGTTGGAAAAAGGAAAATTACTTCGGCACTTGCGGAAACTCTATTTGGAAGCAAACAAAGCCTAATCTCGGTGGATTTGAGCTCTCAGGAAAGGTTTCAACCTTCAAACTCAATTTTTGAATGTCAAGACGTGCTTAGGAGGAAGACAGTTGTGGATTATATTGCTGGCGAGTTGAGTAAAAAGCCGCGTTCGGTTGTGCTTCTTGAAAATATAGATAAAGCTGATATACTTGTGCAGAATAGTTTGTTCCAAGCAATAAGAACAGGAAAATTTCCATACTCACATGGAAGGGAAATCAGCATCAACAATTCAATCTTTGTTGTGACCTCTTCTGTGTTGAAAGATAACGGCTATTCTGATTTGGAAAAGGAGCCTAAAATGTTCAACGAAGAAAGAATCTTTGAAGCTAAAAGATATCAGATTGAATTATCATTTGGACAAGCTTCTGAGGATGTGATGAGAAGCAGTAGTACAATTGTGAGGGTTGCAAAGAGAAAAGGGTCATTTCTGAATAAAAGAAAGCTCGTTGAAATTAGTAATTCCAATGACAAAGTAACTAGCAAGACAATGAAACACGTAAGAGAGGTATCACGGTCCTTTCTTGATCTGAATATGCCTCTAGATGAGGAAGTTGAGGAGGATATTGATTATAATGATTGTGAAAGTGATTCAGCAGTTCAAAAACCTGAAGCATGGTTAAATGATTTCCTTGATCAAATTGATGGAAAAGTGGTTTTTAAGCCTTTCAATTTTGATTATCTTGCTGAGCAAGTAATAGAATGCATTGACAAACAATTTCAAACAACATTTGGATCAGAGTTTGTGCTGGAAATTGATCATGATGTCATGTTACAGATACTTGCAGCTTTTTGGATATCAGACAAGAAAAAATCGGTGGAAGATTGGATTGAACATGTTCTTGGAGGTAGCTTTGTTGAGGCACAAAAGAAGTATCACAATGCAGCTGAGAATGTCATAAAATTGGTTAAATGTGAAAGCATTTTTGTGGAAGAGCAAGCTACAGGAGTATGCCTTCCAGCTAGAATTAATTTGAATTGA 3255 0.3948 MPTPVSTARQCLTDEAARALDDAVSVARRRSHPQTTSLHAISALLSLPSNSLRDACARAGTSPYSPRLQFRALELSVGVSLDRLPTSKSSAVSDGGNGGPPVSNSLMAAIKRSQANQRRHPDSFHLLQIMQQQNQQNQTASFLKVELKHFILSILDDPIVSRVFAEAGFRSYDVKFALLQPPPPSRFFHRSSTPVFLCNIEPVEPFRFDENSRRIVEVIAGKSQGVSKKNPLLIGVYAKTALKRFIELVQSGKIGFLPKELDGLSVISIENEIFEFVVGGGSEEKMGLRFDEVGRLVEQCLGAGVVVSFGEIEVFVKMNDDDDCVNVVGDVVVSRLTRLLEVYGGKIWLIGVAGNCEVFSKFLRLFPTVDKDWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPSDFRNSISCTNSSSSLTLCDTCNEKYEQEVADNVNVVGPSTSASTNLPWLQKVNVDSDNRGLSLAKTNEDNTSLNAKISGLQRKWSDICQHLHQNKSLPEMNVSQTLSRFQSPFHEGFRFGRGTSNLNEIHCSNPIPYMSKELQTPFPSKQIIPFSQPFDTNLCAKDKAVHVPKLSKFDTQSPLLDRKSSSSLTPVTTDLVLGTMYTSVTHEPDTPKLNDHKKHLQHLSDSLSTDFDTMNESTSNQIARSSSYSGPNLDSLFEMVDFKSLYKLLTEKVPLQDEAIYAIIRIMTLCRSGAGKHSQSNSNVRADTWFSFLGPDRVGKRKITSALAETLFGSKQSLISVDLSSQERFQPSNSIFECQDVLRRKTVVDYIAGELSKKPRSVVLLENIDKADILVQNSLFQAIRTGKFPYSHGREISINNSIFVVTSSVLKDNGYSDLEKEPKMFNEERIFEAKRYQIELSFGQASEDVMRSSSTIVRVAKRKGSFLNKRKLVEISNSNDKVTSKTMKHVREVSRSFLDLNMPLDEEVEEDIDYNDCESDSAVQKPEAWLNDFLDQIDGKVVFKPFNFDYLAEQVIECIDKQFQTTFGSEFVLEIDHDVMLQILAAFWISDKKKSVEDWIEHVLGGSFVEAQKKYHNAAENVIKLVKCESIFVEEQATGVCLPARINLN* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3735 1084 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1084 - -
Tpr3g3735 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 670 844 IPR027417 -
Tpr3g3735 1084 SUPERFAMILY Double Clp-N motif 12 124 IPR036628 -
Tpr3g3735 1084 Gene3D - 667 980 IPR027417 -
Tpr3g3735 1084 Coils Coil 474 494 - -
Tpr3g3735 1084 Pfam AAA domain (Cdc48 subfamily) 725 847 IPR003959 GO:0005524|GO:0016887
Tpr3g3735 1084 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 725 743 IPR001270 GO:0005524
Tpr3g3735 1084 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 799 817 IPR001270 GO:0005524
Tpr3g3735 1084 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 832 846 IPR001270 GO:0005524
Tpr3g3735 1084 Gene3D - 10 180 IPR036628 -
Tpr3g3735 1084 ProSiteProfiles Clp repeat (R) domain profile. 8 184 IPR004176 -
Tpr3g3735 1084 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3735 Tpr-Chr3 41679115 41685649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3735 - - gmx:100776148 1382.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3735 3 41679115 41685649 Tpr3g3735 3 41679115 41685649 ECH
Tpr3g3735 3 41679115 41685649 Tpr7g0957 7 8841276 8849956 ECH
Tpr4g2708 4 30084183 30089655 Tpr3g3735 3 41679115 41685649 ECH
Tpr3g3735 3 41679115 41685649 Tpr4g0098 4 1182460 1185424 PCT