Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0877 ATGGCTTCTACCAACAAGGGTGATAGGAAGCTTGCAATTGATCTTGCATCATGGATGTTCAATGTAGTCACATCTGTAGGAATAATCCTTGTGAACAAAGCATTGATGGCTACACATGGTTTCACTTTTGCTACAACATTAACTGGTCTGCATTTTGCCACAACAACCTTGTTGACATTGTTTCTTAAGTGGAATGGATATATCCAAGACACTCATCTTCCTTTGCCTGATCTTATCAAATATGTCATGTTTGCAAATTTCTCTATTGTGGGAATGAATGTTAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCCTGGAAATTGTCTTGGACAATGTGAAATACTCAAGGGATACAAAGCTTAGCATTTCTTTGGTTCTCCTTGGAGTTGCTGTATGTACTGTCACTGATGTGAGTGTCAACGCTAAGGGTTTCATAGCTGCTGCAGTGGCAGTTTGGAGCACCGCACTGCAGCAATATTATGTGCATTTTCTTCAGAAAAAGTATTCTCTCGGATCTTTCAATTTGTTGGGCCATACAGCACCAATACAGGCAACAAGTTTATTGCTAGTTGGCCCCTTTCTTGACTATTGGTTAACAAACAAACGAGTTGATGCCTACAACTACGGTTTAACATCCATTTTGTTCATTGTTTTGTCTTGCTCGATCGCGGTAGGAACAAACCTTAGCCAGTTCATATGCATTGGAAGGTTCACAGCAGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTTGTCCTTACATTAGGATTCATTTTATTTGGAAAAGAGGGTCTCAATCTACAAGTAATAGTAGGCATGATCATCGCTATAATGGGAATGATTTGGTATGGTAATGCATCTTCTAAGCCAGGAGGGAAAGAGTCTCGTAGTAGCTTGTCGATTCCTATTCCTACCTCCAAAACACAAGAGTATAATTTACTACCAGTTGCATCTGCTGAAACTGGTCACAGTGACGAGGAAGTGTGA 1029 0.3994 MASTNKGDRKLAIDLASWMFNVVTSVGIILVNKALMATHGFTFATTLTGLHFATTTLLTLFLKWNGYIQDTHLPLPDLIKYVMFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEIVLDNVKYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYVHFLQKKYSLGSFNLLGHTAPIQATSLLLVGPFLDYWLTNKRVDAYNYGLTSILFIVLSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFILFGKEGLNLQVIVGMIIAIMGMIWYGNASSKPGGKESRSSLSIPIPTSKTQEYNLLPVASAETGHSDEEV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0877 342 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Tpr3g0877 342 PANTHER SOLUTE CARRIER FAMILY 35 8 314 - -
Tpr3g0877 342 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 8 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0877 Tpr-Chr3 8224370 8228128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0877 9 334 Organic Solute Cotransporters AT1G77610 25.000 1.12e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0877 - - mtr:MTR_8g092190 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0877 3 8224370 8228128 Tpr3g0877 3 8224370 8228128 ECH
Tpr3g0877 3 8224370 8228128 Tpr3g3058 3 33159066 33165220 ECH
Tpr3g0877 3 8224370 8228128 Tpr3g3028 3 32712869 32716766 PCT