Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3058 ATGTCATCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCATGGTTGTTTAACGTAGTTACATCTGTGGCAATAATCCTTGTGAATAAAGCCCTGATGGCCACATATGGTTTTAGTTTTGCCACAACTTTAACTGGAATGCATTTTGCCACAACAACTTTGTTGACGGTCATTCTTAAATCACTGGGATATATCCAGACTTCTCATCTTCCAAAATCTGATATCATCAAATTTGTGTTGTTTGCAAATTGCTCCATTGTTGGCATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATCAGATTGCTAAGCTGACTATGATTCCAGTATCTTGCCTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATTATCTTGGTTTTGGCTGGTGTTGCGGTCTGTACAGTCACCGATGTCAGTGTCAATGCAAAGGGTTTCATAGCTGCTGTGATAGCAGTTTGTAGCACAGCTCTGCAGCAGTATTATGTACATTATCTTCAGAGGAAATATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTTCTAGTAGGCCCCTTTATGGATTATTGGTTGACAAACAAACGGGTTGATGCATATGACTATGGTTTGACATCCGTTTTGTTCATCATTCTGTCTTGCACCATTGCAGTAGGGACAAATCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCTGTATCATTCCAAGTCCTTGGCCATATGAAGACTATTCTAGTCCTATTCATGGGATTCATTTTCTTTGGAAAAGAGGGCCTCAATCTACATGTTGTTCTAGGCATGACAATTGCAATAGCAGGAATGGTTTGGTACGGTAATGCTTCTTCTAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCATTCCTACCACTAAGACACAAGATTATGCTGCACTACCGGTGTCCTCTGAATCAGTTGAGAAGGCTACCCCATGA 1014 0.4191 MSSASKGDRKASLDAASWLFNVVTSVAIILVNKALMATYGFSFATTLTGMHFATTTLLTVILKSLGYIQTSHLPKSDIIKFVLFANCSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLEVVLDNVRYSRDTKLSIILVLAGVAVCTVTDVSVNAKGFIAAVIAVCSTALQQYYVHYLQRKYSIGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYDYGLTSVLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLFMGFIFFGKEGLNLHVVLGMTIAIAGMVWYGNASSKPGGKERRSFSIPTTKTQDYAALPVSSESVEKATP* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3058 337 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Tpr3g3058 337 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 314 - -
Tpr3g3058 337 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3058 Tpr-Chr3 33159066 33165220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3058 18 333 Organic Solute Cotransporters AT1G21870 22.018 1.51e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3058 - - gmx:100794276 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3058 3 33159066 33165220 Tpr3g3058 3 33159066 33165220 ECH
Tpr3g0877 3 8224370 8228128 Tpr3g3058 3 33159066 33165220 ECH