Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3028 ATGGGTGAAAGTGGTTTTCAGCTGGGGACTGTTGGTGCTTTGACACTTTCTGTTGTGTCTTCTGTCTCCATTGTTATTTGCAATAAGGCACTCATGAGCTCACTGCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTACTTGTCACATTTTGTTCCCTTCATTTGGCACTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCCGTAGTTGGATTTGGGATTTTAAATGGAATCTCAATTGGACTTTTAAATTTGAGCCTCGGATTCAATTCTGTCGGGTTCTATCAAATGACAAAGCTTGCAATCATTCCTTGTACTGTGCTGTTGGAGACCCTTTTTCTCGGGAAGAAATTCAGTAAAAGAATTCAATTTTCCCTATCTATCCTCCTTATGGGTGTTGGAATTGCAACAGTCACAGATTTGCAGTTGAATGCTCTGGGATCTTTCTTATCTCTTCTGGCGGTGATTACAACATGTGTTGCTCAGATTATGACAAACACTATCCAAAAGAAGTATAAGGTTTCTTCCACCCAGCTCCTATATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCGCTGGTCCGTATCTGGATAAACTTTTGACCGACCAAAATGTATTTGGTTTCAAGTACACAACACAAGTGACGGTTTTCATAGTTCTTTCCTGCCTCATCTCAATTTCTGTCAATTTTAGCACATTTCTTGTGATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTATTGGCATTTGGTTATACTTTGCTCCAGGACCCATTCAGCTGGAGAAACATAATGGGTATTTTGTTGGCGATGGTTGGAATGATTCTGTATTCTTACTATTGCACTCTTGAAAATCAGCAAAAAGCTATTGAAGCTGCGGCACAAGCATCCCAGGCAAGAGAAGGTGAATCTGATCCTCTCATTAATTTGGAAAAAGGAAGCGGTGCTGTGACTGACAGTGTTGGACACAAGACCCCTGTATGGAGCAAAGACAAAGACTAG 1047 0.4088 MGESGFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHLALKMRFFEHKPFEQKAVVGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFLGKKFSKRIQFSLSILLMGVGIATVTDLQLNALGSFLSLLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLIAGPYLDKLLTDQNVFGFKYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLQDPFSWRNIMGILLAMVGMILYSYYCTLENQQKAIEAAAQASQAREGESDPLINLEKGSGAVTDSVGHKTPVWSKDKD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3028 348 MobiDBLite consensus disorder prediction 318 348 - -
Tpr3g3028 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 293 - -
Tpr3g3028 348 PANTHER SOLUTE CARRIER FAMILY 35 4 323 - -
Tpr3g3028 348 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 4 323 - -
Tpr3g3028 348 Pfam Triose-phosphate Transporter family 19 293 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3028 Tpr-Chr3 32712869 32716766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3028 21 332 Organic Solute Cotransporters AT1G77610 25.697 1.79e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3028 K15285 - gmx:100786018 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0877 3 8224370 8228128 Tpr3g3028 3 32712869 32716766 PCT