Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1090 ATGGGCATAAAAAAATCCAACAAACTACAACAATCTGAAGTTATCAAGCAAATTCTCAAAAGATGTTCAAGTTTTGGTAAAAAGCAAGGTCTTCCTGAGGATGTACCAAGAGGTCATTTTGCAGTTTATGTTGGAGAGAATAGGACTAGATATATTGTCCCAATTTCTTGGTTGGAACATCCTCAATTTCAAAATCTTCTACAAAGAGCTGCAGAGGAATTTGGTTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAAGATGTTTTTGAGTCCTTAATTTCATTGATGAGATAA 300 0.3467 MGIKKSNKLQQSEVIKQILKRCSSFGKKQGLPEDVPRGHFAVYVGENRTRYIVPISWLEHPQFQNLLQRAAEEFGFNHDMGLTIPCDEDVFESLISLMR* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1090 99 Pfam Auxin responsive protein 22 97 IPR003676 GO:0009733
Tpr2g1090 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 99 IPR003676 GO:0009733
Tpr2g1090 99 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1090 Tpr-Chr2 12792603 12793316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1090 5 98 Calmodulin-binding Proteins AT4G34750 44.898 1.74e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1090 K14488 - gmx:100500218 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1090 2 12792603 12793316 Tpr4g4258 4 49745997 49746787 ECH
Tpr7g0248 7 2022243 2023083 Tpr2g1090 2 12792603 12793316 ECH
Tpr2g1090 2 12792603 12793316 Tpr2g1090 2 12792603 12793316 ECH
Tpr3g2425 3 23076252 23076819 Tpr2g1090 2 12792603 12793316 ECH