Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0248 ATGGCTTTAAGAAAATCAACTAAACTTCCTCAAACAGCACTGATCAAACAAATCCTTAAAAGATGTTCAAGTTTAGGGAAGAAAGATGATCCTTGTATGGATGTTCCAAAAGGTCACTTTGTTGTATATGTTGGTGAAAACAGAAGCAGGTACATTGTTCCAATTTCATTTCTAAGTAGACCAGAGTTTCAAAACCTTTTACATCAAGCTGAAGAAGAGTTTGGATTTGATCATGATATGGGTCTTACTATTCCTTGCCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTTCAAAGATAG 303 0.3498 MALRKSTKLPQTALIKQILKRCSSLGKKDDPCMDVPKGHFVVYVGENRSRYIVPISFLSRPEFQNLLHQAEEEFGFDHDMGLTIPCQQHVFESLTSMLQR* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0248 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 99 IPR003676 GO:0009733
Tpr7g0248 100 Coils Coil 91 100 - -
Tpr7g0248 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 99 - -
Tpr7g0248 100 Pfam Auxin responsive protein 27 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0248 Tpr-Chr7 2022243 2023083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0248 5 100 Calmodulin-binding Proteins AT4G34750 41.000 1.99e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0248 K14488 - gmx:100778552 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0248 7 2022243 2023083 Tpr2g1090 2 12792603 12793316 ECH
Tpr7g0248 7 2022243 2023083 Tpr4g4258 4 49745997 49746787 ECH
Tpr7g0248 7 2022243 2023083 Tpr7g0248 7 2022243 2023083 ECH