Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2425 ATGGCCATTAAGAAATACTCAAACAAACTTCCTCAAAATGCAGTCTTGAAACAAATCCTAAAAAGATGTTCAAGCTTAGGCAAGAAAAACGATTATAACAACGATAATGATTACCCTGTTGATGTCCCAAAAGGTCATTTTGCTGTTTATGTTGGTGAAAACAGAAGTAGATATATTGTTCCAATCTCGTTTTTAACTCACCCTGAGTTTCAATCACTACTTCGTCAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGTCTAACAATTCCTTGTCAAGAAGTTGTTTTTCAGTCTCTAACATCAATGATAAGATGA 321 0.3427 MAIKKYSNKLPQNAVLKQILKRCSSLGKKNDYNNDNDYPVDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCQEVVFQSLTSMIR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2425 106 Pfam Auxin responsive protein 28 105 IPR003676 GO:0009733
Tpr3g2425 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 106 IPR003676 GO:0009733
Tpr3g2425 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2425 Tpr-Chr3 23076252 23076819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2425 7 105 Calmodulin-binding Proteins AT4G34750 43.000 2.08e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2425 K14488 - oeu:111410569 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2425 3 23076252 23076819 Tpr3g2425 3 23076252 23076819 ECH
Tpr3g2425 3 23076252 23076819 Tpr2g1090 2 12792603 12793316 ECH
Tpr3g2425 3 23076252 23076819 Tpr4g4258 4 49745997 49746787 ECH