Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3933 ATGGCTTTACATGAGCATTCAGATGTTTTTCAGTGGGGTATGAATCTATTTGATGTCGATCCTTGTTATAGTCCTGGATACTATGGTGACATAATTCAACATGACACTGGTGATGTCTACCATGAACACTACTTTCACAGCAATTATGATTCTGCTGAAAGTAACCAAGTAGAGAATGATGAGATCATTGCACGGACTCTTCAAGAAGAGTTTTCACAGCTTGAGATCGCTGATGAGCGTTCAAGTTATTCACAGGCAGATGTAGAACAGTTTAATGCTTCTGTGCCTTCATATGATTGGCATAACACACCGATGATGAACTATTGTTCAGGAGGTCATGATTATGTCCATGAAGGAGTTGGTGATGTAGAAACTTCTAGTTCAAGTAGTCCTGGTGAAGTTGGGGGATGCTCATTGGAGCTTGTTGACAATTATCCATTTGATGATGAAATAGGAAGGAGATTGAATGAGATAACTCCCATACCTCACATTCCAAAAATTAATGGAGAAATTCCTTCTATTGATGAAGCAACATCGGATCATGAAAGGCTTCTGGATAGATTGCGATTATATGACTTTGTGGAGCATAAGGTACAAGGTGATGGAAATTGTCAGCTAAAGTCTCATCCAGATATTTATGAAGGATACGTTCCCATGAAATTTAGTGAATATTTGGAAAATATGTCTAGGAGTGGTGAATGGGGCGATCATGTCACTCTTCAAGCAGCTGCAGATTTGTATGGTGTAAGAATATTTTTGATGACTTCTTTCAAGGACACATGTTGCATTGAGATTCTTCCTAGTTTTGAGAAGCCAAAAGGAGTAATTTTCATAAGTTTTTGGGCAGAGGTGCATTACAACTCCATCTATCCTCAAGGAGATATAACTTCATGTGAGTCAAGAAAGAAGAAAAGGTGGTGGAGCTTTGAGACCAAGCATCAATAG 945 0.3873 MALHEHSDVFQWGMNLFDVDPCYSPGYYGDIIQHDTGDVYHEHYFHSNYDSAESNQVENDEIIARTLQEEFSQLEIADERSSYSQADVEQFNASVPSYDWHNTPMMNYCSGGHDYVHEGVGDVETSSSSSPGEVGGCSLELVDNYPFDDEIGRRLNEITPIPHIPKINGEIPSIDEATSDHERLLDRLRLYDFVEHKVQGDGNCQLKSHPDIYEGYVPMKFSEYLENMSRSGEWGDHVTLQAAADLYGVRIFLMTSFKDTCCIEILPSFEKPKGVIFISFWAEVHYNSIYPQGDITSCESRKKKRWWSFETKHQ* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3933 314 ProSiteProfiles OTU domain profile. 193 292 IPR003323 -
Tpr1g3933 314 SUPERFAMILY Cysteine proteinases 180 292 IPR038765 -
Tpr1g3933 314 Gene3D - 205 298 - -
Tpr1g3933 314 PANTHER OTU DOMAIN CONTAINING PROTEIN 205 309 - -
Tpr1g3933 314 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 208 - -
Tpr1g3933 314 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 205 309 - -
Tpr1g3933 314 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3933 Tpr-Chr1 43564029 43571094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3933 - - gmx:100811851 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1028 1 9034230 9041057 Tpr1g3933 1 43564029 43571094 ECH
Tpr1g3933 1 43564029 43571094 Tpr1g1028 1 9034230 9041057 ECH
Tpr1g3933 1 43564029 43571094 Tpr1g3933 1 43564029 43571094 ECH
Tpr6g0894 6 7822178 7827638 Tpr1g3933 1 43564029 43571094 PCT