Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0894 ATGGTTTTATACGACCATTCAGATGTTTATCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGGTTATAATCTGGGGTACTATGACAACATAGTTCAACATGATACCAGTGACATCTATAATGGACACTACTTCAATAGTCATTACGATAACGAGTGTAACCATGTAGAGAGTGATGAGATCCTTGCTCGTGCTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAAGATATTTACAAGGAGGTGAAAATCAGTTTCATGTTACTGAGACCGAGCCATCATATGATTGGCATGATCCTTCAATGGTCAATTATTGTTCAGAAGGTCATGATTATGCCCAAGAAGGAGTTGGTGATGTAGAAAGTTCATGTTCTAGTCCCCCTGAAACAGAAGAGTATTCATTGGAGATAACCGACAATTATCCACTTGATGATGAAGTGGGGAAGAGATTGAGTCAAATGATACCTATTCCTCATGTTCCGAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCTACATCAGATCATCAAAGGCTTCTGGATAGATTGCAACTATATGACTTTGTGGAGAACAGGGTGCATGGTGATGGTAATTGTCAGTTCCGTGCACTGTCTGATCAATTGTATCATGCCCCTGAGCGCCACAAGTTTGTGAGAAGACATGTTGTCAATCAGCTCAAATCTAATCCGGAGATTTATGATGGATATGTTCCCATGGAATACGGTGACTATTTGGACAAGATGTCAAAGAGTGGAGAATGGGGTGATCATGTCACTCTTCAAGCTGCTGCAGATTCGTATGGTGTGAGAATATTTGTCATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTTCTGAGTTTTTGGGCAGAGGTGCATTATAATTCCATCTACCCTCAAGGAGATATAACTTCAAATGAGTCAAGAAAGAAGAAAAAATGGTGGAGCTTTGGGAACAAGAATTAG 1014 0.3974 MVLYDHSDVYQWGLNLLDGDPGYNLGYYDNIVQHDTSDIYNGHYFNSHYDNECNHVESDEILARALQEEFSQLEIAESSRYLQGGENQFHVTETEPSYDWHDPSMVNYCSEGHDYAQEGVGDVESSCSSPPETEEYSLEITDNYPLDDEVGKRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVENRVHGDGNCQFRALSDQLYHAPERHKFVRRHVVNQLKSNPEIYDGYVPMEYGDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDITSNESRKKKKWWSFGNKN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0894 337 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 333 - -
Tpr6g0894 337 ProSiteProfiles OTU domain profile. 192 316 IPR003323 -
Tpr6g0894 337 Gene3D - 173 322 - -
Tpr6g0894 337 SUPERFAMILY Cysteine proteinases 178 316 IPR038765 -
Tpr6g0894 337 Pfam OTU-like cysteine protease 199 284 IPR003323 -
Tpr6g0894 337 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 26 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0894 Tpr-Chr6 7822178 7827638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0894 - - aip:107648617 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0894 6 7822178 7827638 Tpr1g3933 1 43564029 43571094 PCT