Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1028 ATGATGACATCACATGACATGGATCCTGATGTTGTTCGATGGGGCCTACATCTCCTAGATGGTTGCACATTTGTCCATGGTCGGTCCCCTAGTGTCGTAACTAGATGTGATCCCGATTTAAGTCAAGTTGAATATGTTAGGGAAGGCTTCTGTGAGTATTCAAATGTTGAACATGATGAGGCTGTTGCACGTGCTTATCAAGAAGAATTATCGCAACTTGACTCCATGGAGGCTTCTGGGATGACCAATTTTGAGAATGAGCAAGTGCGAGCATCTGTAAATGCGCAAGATTGGCTATCTTCTTCAAATCGGAGCTATAACTTTGATAATCAACATGTAGGCGATGCATCTTGCCAGAATCCCGGAGATGAGTCATGTCGTATGAAAGAGGTGGATGATTGTGGTCCAAGTGGAAGGGAAAACAACATGCATGAAGTTGGAGCATTTAATTCATCTTTTAGGTCAGGAGAGATGCCCTTCATTACTGATGAAATGTGGCATTCGTTGGAAATATCGGATGAGTCTTCTCTTGATGGTGAAGTAGGCAAAAGATTAAACCAGATGGTTCCCATTCCTCATGTTCCTAAAACCAATGAAAAAATACCATCTGATGACGAAGAAATATCAGACCATCAAAGGCTGCTAGACAGACTGCAGTTATATGAACTGATTGAATCTAAGGTTGAAGGAGATGGAAACTGCCAGTTTCGTGCTTTATCGGATCAACTCTATCGCTCTCCAAACCTCCACAAATTTGTAAGGGAACAAATTGTTCAACAGCTCAAGTCCGACCCAGATCTATATGCTGGTTATGTTCCTATGACTTATAGTGAATATTTAAAGAAGATGAGCAAGAGTGGTGAATGGGGCGACCATGTCACATTGCAGGCAGCTGCAGATTGGTATGGTGTCAAAATATTTGTGATTACATCTTTCAAGGACACATGTTACATTGAGATTCTTCCACAAACACAGAAGTCTGGAAGGGTAATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATTTATCCAGAAGGAGAAATGCCTTCATCTTATGAAAAGAAAAAAAAGAAGTGGTGGAATTTTGGCGGTTAG 1101 0.4124 MMTSHDMDPDVVRWGLHLLDGCTFVHGRSPSVVTRCDPDLSQVEYVREGFCEYSNVEHDEAVARAYQEELSQLDSMEASGMTNFENEQVRASVNAQDWLSSSNRSYNFDNQHVGDASCQNPGDESCRMKEVDDCGPSGRENNMHEVGAFNSSFRSGEMPFITDEMWHSLEISDESSLDGEVGKRLNQMVPIPHVPKTNEKIPSDDEEISDHQRLLDRLQLYELIESKVEGDGNCQFRALSDQLYRSPNLHKFVREQIVQQLKSDPDLYAGYVPMTYSEYLKKMSKSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQTQKSGRVIFLSFWAEVHYNSIYPEGEMPSSYEKKKKKWWNFGG* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1028 366 MobiDBLite consensus disorder prediction 125 139 - -
Tpr1g1028 366 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 26 364 - -
Tpr1g1028 366 Pfam OTU-like cysteine protease 230 315 IPR003323 -
Tpr1g1028 366 ProSiteProfiles OTU domain profile. 223 347 IPR003323 -
Tpr1g1028 366 SUPERFAMILY Cysteine proteinases 205 346 IPR038765 -
Tpr1g1028 366 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 364 - -
Tpr1g1028 366 MobiDBLite consensus disorder prediction 116 139 - -
Tpr1g1028 366 Gene3D - 204 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1028 Tpr-Chr1 9034230 9041057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1028 - - gmx:100820379 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1028 1 9034230 9041057 Tpr1g3933 1 43564029 43571094 ECH
Tpr1g3933 1 43564029 43571094 Tpr1g1028 1 9034230 9041057 ECH
Tpr1g1028 1 9034230 9041057 Tpr1g1028 1 9034230 9041057 ECH