Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1273 ATGGAAATGATTACAAGGATGGTGAATGATAAGGCTGTGGTGATATTTAGCAAAAGCACATGTTGTTTGAGTCACTCCATCATGTCATTGATAAGAAACTTTGGTGCAAACCCAATTGTTTATGAGCTTGATGAGATGACAAATGGGATACAGATTGAAAGAGAATTGCTTCAATTGGGGTGCCAACCAAGTGTACCAGCTGTGTTTATTGGGCAACAACTCATTGGTGGCTCTAAAAGAATCATGACACTCCATCTTCGCAATGAGTTAGGACCAATGTTGAAATGA 288 0.3924 MEMITRMVNDKAVVIFSKSTCCLSHSIMSLIRNFGANPIVYELDEMTNGIQIERELLQLGCQPSVPAVFIGQQLIGGSKRIMTLHLRNELGPMLK* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1273 95 Gene3D Glutaredoxin 1 95 - -
Tpr1g1273 95 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Tpr1g1273 95 PANTHER GLUTAREDOXIN 1 94 IPR011905 -
Tpr1g1273 95 SUPERFAMILY Thioredoxin-like 1 95 IPR036249 -
Tpr1g1273 95 CDD GRX_GRXh_1_2_like 12 93 - -
Tpr1g1273 95 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Tpr1g1273 95 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Tpr1g1273 95 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Tpr1g1273 95 Pfam Glutaredoxin 13 75 IPR002109 -
Tpr1g1273 95 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 94 - -
Tpr1g1273 95 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 95 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1273 Tpr-Chr1 11451607 11451921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1273 1 95 Miscellaneous Gene Families AT4G15690 55.789 3.94e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1273 K03676 - gmx:100811394 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0567 6 4581024 4581613 Tpr1g1273 1 11451607 11451921 PCT
Tpr1g1273 1 11451607 11451921 Tpr6g0566 6 4569984 4570292 PCT