Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0567 ATGTCAACAATCACAAGTTTGGTTGGTGAAAAGCCAGTAGTGATATTCAGCAAGAGTACATGTTGCTTAAGTCACTCAGTAACATCACTGATACGTAGCTTTGGCGCAAACCCGATTGTTTATGATCTTGATAAAATCGAAAATGGATCGCAGATTGAGAGTGAATTGCTTCAAATGGGGATTAAACCAAGTGTACCTGCTGTTTTCATTGGACAACAATTCAGAGGTGGTTCTAAGAAAATTATGAGTCTTCATGTTAGGAATGAATTGGTGCCAATGTTGAAGGATGCTGGTGCTATATGGATTTGA 309 0.3851 MSTITSLVGEKPVVIFSKSTCCLSHSVTSLIRSFGANPIVYDLDKIENGSQIESELLQMGIKPSVPAVFIGQQFRGGSKKIMSLHVRNELVPMLKDAGAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0567 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Tpr6g0567 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Tpr6g0567 102 Gene3D Glutaredoxin 1 101 - -
Tpr6g0567 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Tpr6g0567 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Tpr6g0567 102 CDD GRX_GRXh_1_2_like 12 93 - -
Tpr6g0567 102 Pfam Glutaredoxin 13 74 IPR002109 -
Tpr6g0567 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0567 Tpr-Chr6 4581024 4581613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0567 1 102 Miscellaneous Gene Families AT4G15690 50.980 1.96e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0567 K03676 - gmx:100789514 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0567 6 4581024 4581613 Tpr1g1273 1 11451607 11451921 PCT
Tpr1g1272 1 11439564 11440274 Tpr6g0567 6 4581024 4581613 PCT