Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0566 ATGGATTTGTTAGCATCATTAACAGAAAACAAACCAGTAGTGATCTTCAGCAAAAGTACTTGTGTCATGAATCCTACTATGATAGCACTTATAAGAGGTTTTGGTGCTGAACCTATGGTTATTGAGATTGATAAAATGGCAAATGGATATCAATTAGAGAGAGCACTATTTCAGCTTGGTTGTAGACCAAGTGTACCAGCAGTTTTCATAGGACAACAATTTGTAGGTGGTACTGATGAAGTTATAAGTCTCAATGTTCAAAATAAGCTTTCTCAATTGCTTTTAAAGGCTAGAGCTATTTGGTTATAG 309 0.3495 MDLLASLTENKPVVIFSKSTCVMNPTMIALIRGFGAEPMVIEIDKMANGYQLERALFQLGCRPSVPAVFIGQQFVGGTDEVISLNVQNKLSQLLLKARAIWL* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0566 102 Gene3D Glutaredoxin 2 100 - -
Tpr6g0566 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Tpr6g0566 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Tpr6g0566 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Tpr6g0566 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Tpr6g0566 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Tpr6g0566 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 102 IPR011905 -
Tpr6g0566 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Tpr6g0566 102 Pfam Glutaredoxin 13 75 IPR002109 -
Tpr6g0566 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Tpr6g0566 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0566 Tpr-Chr6 4569984 4570292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0566 1 102 Miscellaneous Gene Families AT4G15700 44.118 3.14e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0566 K03676 - gmx:106794948 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1273 1 11451607 11451921 Tpr6g0566 6 4569984 4570292 PCT