Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1956 ATGGCTAAGGGTCCAGGTCTTTACACTGACATCGGAAAGAAAGCCAGAGATCTTCTATTCAAGGACTATCAAAGCGACCAGAAGTTCACCCTCACCACCCACTCGACCAATGGACTTGTTATAACATCATCAGGAACTAAGAAGGGTGACCAGATCTTGGCTGATGTTAATACCCAAATAAAGAGAGGTAACGTCACAGCTGATATCAAAGTCGATGCTGATTCTAATCTCTTCACAACAGTCAAAGTTGATGAGCCTGCTCCTGGTGCCAAGGCTATCTTTAGCTTCAGAGTTCCTGATCAAAGGTCTGGAAAGGTGGAGCTTCAGTACCTGCATGACTATGCTGGGATATGCACTAGCATTGGGTTGACAGCAAATCCAGTTGTCAACTTCTCTGGTGTTTTAGGAAGTAATGCTTTTGCTGTTGGTACAGATATTTCTTTTGACACCAAAACTGGAgatttgactaaatttaatgCTGGAGCGAGCTTCACCAGGGCAGATTTGATTGCATCATTGAATCTAAATGACAAAGCTGATGCTCTGAATGCTTCGTACTACCATGTAATCAACCCCTTGACCAGCACAGCTGTTGGTGCTGAGGTGACTCACAGATTCTCAACCAACGAGAATACCCTTACAATTGGCAGCCAGCATGCATTAGATCCATTGACCACATTGAAGGCTCGTGTGAACAACTTTGGCAAGGCTAGTGCCCTTATCCAGCATGAATGGCGTCCCAAATCATTCTTCACCATTTCTGGGGAGGTAGACACCAAAGCCATTGAGAAGAGTGCCAAGGTTGGATTGGCTTTGGCTCTCAAGCCATGA 831 0.444 MAKGPGLYTDIGKKARDLLFKDYQSDQKFTLTTHSTNGLVITSSGTKKGDQILADVNTQIKRGNVTADIKVDADSNLFTTVKVDEPAPGAKAIFSFRVPDQRSGKVELQYLHDYAGICTSIGLTANPVVNFSGVLGSNAFAVGTDISFDTKTGDLTKFNAGASFTRADLIASLNLNDKADALNASYYHVINPLTSTAVGAEVTHRFSTNENTLTIGSQHALDPLTTLKARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1956 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto8g1956 276 Gene3D Porin 1 275 IPR023614 -
Sto8g1956 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto8g1956 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto8g1956 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Sto8g1956 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1956 Sto-Chr8 12647043 12650022 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1956 K15040 - gmx:100802449 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1956 8 12647043 12650022 Sto12g0874 12 5474099 5475547 ECH
Sto8g1956 8 12647043 12650022 Sto8g1956 8 12647043 12650022 ECH
Sto11g0996 11 10288520 10290497 Sto8g1956 8 12647043 12650022 ECH