Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0996 ATGGCAGAAGGTCCCGTTCTTCACCATGATATGGACAAAAAAATTCGAGATCTTCTATACAAGGATTATACGAGCGGCCATAAGGTTATTATCACCTCTCACACACCCTCTGGACTGGAAATTACTTCAAGTGTAGCCCACAAGGATGATGCATTTTCAGTTGGTTATGGCACTCAGTTAAAGAACGAGAATATCACTACCAATATAAAAGTGGGCGTCGACTCAAAtAAAATACTTCAGCACATTATATCCATTATTGTGGACGAACCTGTGCCTGGCCTCAAGGCAATTTTTAACTATATTCTTCCATACAATAGATATGGCAAGATAGAGCTCCAGTACCGAAATAAGTATGCTGCAATTAGCACTAGCCTTATAACAACGGTCAATCCCATTGTAAACTTTTCGAGTTTATTTGGAAGTAAATATTTCGGACTCGGAATAGATATTTCATTTGATTCTGCTTCTAGAAACTTCATCAAACACAATGCAGGCTTGTATTGGTTTGCTAATTGCATCAATTGTACTTCATCTCTGACTTTGAACAACAAAGGGGACAACCTTACAGGCTCAATTTTCCACACCAATAAGAAGAGAACATATGCTGTGGGTTCAGAATTTTGTGGTAACATTTATTCCCAAGAATTGACTCTTACTGTGGGATTACAATGTGTacttaatccccaaaccttgaTGAAAGTTCGATGGAACAATCATGACAAGGTAAATGTTTTGATTCATCATGATGTGAATTCTAGAACTCGTTTCATTGTGTCTGGTGAGATGAAAACGATGGACATTGAAAGTGATGTTAAACTTGGTCTAGCTTTGGTTTTGAAGTCTTAG 846 0.3676 MAEGPVLHHDMDKKIRDLLYKDYTSGHKVIITSHTPSGLEITSSVAHKDDAFSVGYGTQLKNENITTNIKVGVDSNKILQHIISIIVDEPVPGLKAIFNYILPYNRYGKIELQYRNKYAAISTSLITTVNPIVNFSSLFGSKYFGLGIDISFDSASRNFIKHNAGLYWFANCINCTSSLTLNNKGDNLTGSIFHTNKKRTYAVGSEFCGNIYSQELTLTVGLQCVLNPQTLMKVRWNNHDKVNVLIHHDVNSRTRFIVSGEMKTMDIESDVKLGLALVLKS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0996 281 Pfam Eukaryotic porin 5 272 IPR027246 GO:0005741|GO:0055085
Sto11g0996 281 CDD Porin3_VDAC 5 280 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto11g0996 281 Gene3D Porin 1 280 IPR023614 -
Sto11g0996 281 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 280 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto11g0996 281 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 1 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0996 Sto-Chr11 10288520 10290497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0996 K15040 - csv:101222822 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0996 11 10288520 10290497 Sto11g0996 11 10288520 10290497 ECH
Sto11g0996 11 10288520 10290497 Sto12g0874 12 5474099 5475547 ECH
Sto11g0996 11 10288520 10290497 Sto8g1956 8 12647043 12650022 ECH