Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0874 ATGAGCAAGTGTCCTGGCTTATATTTTGATATTGGGAAAAGGGCTAAAGATGTTCTTCACAAGAACTATGCCCACCAGCCACCCATTCACTATCACTACCAATTCATGGACTGGAATTTAGATCTTTCTTGTCAACTAGATGCTATTGTGCCTGGACTGAGGAGTATCTGCAACTTCACCATACCTGATTCCGGGAagGTGGAACTGCAACACCTGAGTAACTACACAGGGATTACTGGGTGCATTGGATTGATAGGAAAAGTAGATGGAGGATATGAACCTGTTGTGAACTTCTCGGGTCTTATAGGAACAAATATTCTGTCTTTGGGAGCCAACGTAGCTTTTGACATATCATCAAGAGAAATCAAGACTATCAATACTGGTTTCAGCCTCAACACTGACTTCTTCGTTGCTTCTATGACCATGCATGACAAGTTTGACACAATGAAAGCTTCGTGCTATCATGAAGTGAACCCTCTGACGAAGACAGCCATAGCAGCAGAGGTGAAGCACAGTTTTTCAATGAACGAGACAGGTATAACCATTGGTGCTCAGCATGCAATGGTTCCAAGTACAACGGTGAAGGCTAAACTTGACACTAACGGCAAGGTGGGTGCCCTTATTCAGCAAGAGATATGGCAGAGATGTTGTATATCTATGGCTGGAGAAATGGATTTTAGGGCCGAAAGTAAAGTTCCTAAGGTTGGACTCTCTCTGGCTCTAAAACCCTAG 732 0.4331 MSKCPGLYFDIGKRAKDVLHKNYAHQPPIHYHYQFMDWNLDLSCQLDAIVPGLRSICNFTIPDSGKVELQHLSNYTGITGCIGLIGKVDGGYEPVVNFSGLIGTNILSLGANVAFDISSREIKTINTGFSLNTDFFVASMTMHDKFDTMKASCYHEVNPLTKTAIAAEVKHSFSMNETGITIGAQHAMVPSTTVKAKLDTNGKVGALIQQEIWQRCCISMAGEMDFRAESKVPKVGLSLALKP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0874 243 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto12g0874 243 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
Sto12g0874 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Sto12g0874 243 Pfam Eukaryotic porin 37 235 IPR027246 GO:0005741|GO:0055085
Sto12g0874 243 Gene3D Porin 3 242 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0874 Sto-Chr12 5474099 5475547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0874 K15040 - gmx:100787061 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1956 8 12647043 12650022 Sto12g0874 12 5474099 5475547 ECH
Sto11g0996 11 10288520 10290497 Sto12g0874 12 5474099 5475547 ECH
Sto12g0874 12 5474099 5475547 Sto12g0874 12 5474099 5475547 ECH