Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0742 ATGGCGGCGGAGACCTTTCTATTCACCTCTGAATCAGTGAACGAGGGACACCCTGACAAGCTCTGTGACCAGATCTCCGACGCCGTTCTCGATGCTTGCCTTGAACAGGACCCAGACAGCAAGGTTGCCTGCGAGACCTGCACTAAGACCAACATGGTCATGGTTTTCGGTGAGATCACAACCAAGGCCAACGTAGACTATGAGAAAATCGTCCGTCAAACTTGCAGGAACATTGGGTTCGTCTCTGATGATGTTGGTCTTGATGCCGACAACTGCAAGGTCCTTGTCAACATCGAGCAACAGAGTCCTGATATTGCTCAGGGTGTCCATGGACATCTCACCAAGAGGCCAGAGGAAATCGGTGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACTGATGAGACCCCTGAGTTCATGCCCCTCAGCCATGTGCTCGCCACAAAGCTCGGTGCCCGGCTCACCGAGGTTCGCAAGAATGGCACCTGCCCGTGGTTGAGGCCTGATGGGAAGACCCAAGTCACCGTGGAGTATTACAATGACAAGGGAGCCATGGTTCCTATTCGTGTGCACACTGTGCTTATCTCCACCCAGCACGATGAGACCGTGACCAATGATGAAATTGCAGCTGATCTCAAAGAGCATGTGATCAAGCCTGTGATCCCTGAGAAGTACCTTGACGAGAAGACCATCTTTCACCTCAACCCTTCAGGCCGTTTCGTCATTGGTGGTCCTCATGGTGATGCAGGTCTCACTGGCAGGAAGATCATCATTGACACCTATGGAGGATGGGGTGCCCATGGTGGTGGTGCCTTCTCTGGAAAGGACCCAACCAAGGTTGATAGGAGTGGGGCTTACATTGTGAGGCAGGCTGCTAAGAGCATTGTGGCTAATGGACTTGCTAGAAGGTGCATTGTGCAAGTGTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTGTTTGTTGACTCTTATGGAACTGGGAAGATCCCAGACAAGGAGATCCTGAAGATTGTGAAGGAGAACTTTGATTTCAGGCCTGGAATGATCTCTATCAACCTTGACCTCAAGAGGGGTGGGAATGGAAGGTTCTTGAAGACTGCCGCTTATGGGCATTTTGGTAGGGATGACGCTGACTTTACATGGGAGGTGGTGAAGACCCTCAAGGGGGAGAAGGTTCCAGCCTAA 1188 0.5177 MAAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRQTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKTLKGEKVPA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0742 395 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 4 393 - -
Sto3g0742 395 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 4 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto3g0742 395 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Sto3g0742 395 Hamap S-adenosylmethionine synthase [metK]. 4 395 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto3g0742 395 Gene3D - 13 281 - -
Sto3g0742 395 SUPERFAMILY S-adenosylmethionine synthetase 242 389 IPR022636 GO:0004478|GO:0006556
Sto3g0742 395 CDD S-AdoMet_synt 7 386 - -
Sto3g0742 395 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Sto3g0742 395 Gene3D - 6 244 - -
Sto3g0742 395 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 383 IPR022630 GO:0004478|GO:0006556
Sto3g0742 395 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Sto3g0742 395 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto3g0742 395 Gene3D - 119 383 - -
Sto3g0742 395 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Sto3g0742 395 TIGRFAM metK: methionine adenosyltransferase 7 389 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto3g0742 395 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Sto3g0742 395 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0742 Sto-Chr3 5104227 5105414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0742 K00789 - gmx:100787994 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0742 3 5104227 5105414 Sto3g0742 3 5104227 5105414 ECH
Sto3g0742 3 5104227 5105414 Sto8g0285 8 1866286 1867470 ECH
Sto3g0742 3 5104227 5105414 Sto13g3738 13 39231662 39232843 ECH