Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3738 ATGGAGGAGACCTTTCTTTTCACTTCTGAATCTGTCAATGAGGGTCACCCCGACAAGCTGTGCGACCAGGTCTCTGATGCAGTTCTTGATGCCTGCCTTGAACAGGACCCTGACAGCAAGGTTGCTTGTGAGACATGCACCAAGACCAATATGGTCATGGTCTTTGGAGAGATTACAACCAAGGCCAACATAGACTACGAGAAGATTGTCCGCGACACATGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTCTTGATGCTGACAAATGCAAGGTCTTGGTCAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGTGTTCACGGCCACTTTACCAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGGTATGCCACTGACGAAACCCCAGAATATATGCCCCTGAGCCATGTCCTTGCAACCAAGTTAGGAGCTCGCCTTACTGAGGTTAGGAAGAACGGTACCTGCGCTTGGCTGAGACCAGATGGCAAGACACAAGTAACTGTTGAGTACTACAATGACAAAGGTGCTATGGTTCCAGTACGTGTCCACACTGTCCTCATTTCCACTCAGCATGATGAGACCGTCACTAATGATCAAATTGCTGCTGATCTTAAGGAGCATGTTATTAAGCCTGTCATCCCTGAGAAATACCTAGATGACAAGACCATCTTTCACCTCAACCCCTCTGGCCGCTTTGTCATTGGTGGTCCTCATGGTGATGCTGGTCTAACTGGAAGAAAGATTATTATTGATACTTATGGTGGGTGGGGTGCCCATGGTGGTGGTGCTTTCTCCGGTAAGGATCCTACTAAGGTTGACAGAAGTGGTGCCTATGTTGCCAGGCAAGCAGCCAAGAGTATTGTGGCAAATGGGCTTGCCCGCAGGTGCATTGTGCAAGTTTCGTATGCCATTGGTGTTCCTGAGCCCTTGTCCGTCTTTATTGACTCCTACGGAACTGGAAAGATTCCAGACAAGGAGATTCTTCAAATTGTGAAGGAGAACTTCGACTTCAGGCCTGGAATGATCACCATTAATTTGGACCTTAAGAGGGGTGGCCATAGGTTTCTCAAGACAGCTGCTTATGGACACTTTGGAAGGGATGACCCAGACTTCACCTGGGAAGTTGTGAAGCCACTCAAGTGGGAAAAGCCTCAAGCTTAA 1182 0.489 MEETFLFTSESVNEGHPDKLCDQVSDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFIDSYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3738 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Sto13g3738 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Sto13g3738 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Sto13g3738 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto13g3738 393 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto13g3738 393 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 393 - -
Sto13g3738 393 TIGRFAM metK: methionine adenosyltransferase 6 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto13g3738 393 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Sto13g3738 393 SUPERFAMILY S-adenosylmethionine synthetase 241 390 IPR022636 GO:0004478|GO:0006556
Sto13g3738 393 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Sto13g3738 393 Hamap S-adenosylmethionine synthase [metK]. 3 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto13g3738 393 CDD S-AdoMet_synt 6 384 - -
Sto13g3738 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 381 IPR022630 GO:0004478|GO:0006556
Sto13g3738 393 Gene3D - 118 381 - -
Sto13g3738 393 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Sto13g3738 393 Gene3D - 5 243 - -
Sto13g3738 393 Gene3D - 12 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3738 Sto-Chr13 39231662 39232843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3738 K00789 - gmx:100777770 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3738 13 39231662 39232843 Sto13g3738 13 39231662 39232843 ECH
Sto3g0742 3 5104227 5105414 Sto13g3738 13 39231662 39232843 ECH