Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0285 ATGGATACCTTCTTGTTCACTTCTGAATCAGTAAACGAGGGTCATCCAGACAAGCTGTGTGATCAGATTTCCGATGCAGTGCTTGATGCTTGCTTGGAGCAAGATCCAGAGAGCAAGGTGGCTTGTGAGACCTGCACAAAAACCAACATGGTCATGGTGTTTGGAGAGATCACCACAAAAGCCAATATAGACTATGAGAAAATTGTGCGTCAAACATGTCGATCCATCGGCTTCATCTCCAACGATGTGGGCCTTGATGCTGACAATTGTAAGGTCCTACTCTGCATTGAGCAACAAAGCCCTGATATTGCACAGGGAGTCCACGGTCACCTCACAAAACAACCTCAGGACATAGGTGCTGGTGATCAAGGTCACATGTTTGGCTACGCCACTGATGAAACACCTGAGCTAATGCCTCTTAGCCACGTCCTGGCCACGCAGCTCGGTGCACGCCTAACCCAAGTTCGCAAGAATGGGACATGCCCTTGGCTAAGACCAGATGGAAAAACCCAAGTCACTGTGGAGTATTACAATGACCGTGGTGCTATGGTTCCGGTTCGTGTGCACACTGTTTTGATTTCCACACAGCATGATGAAACTGTTACTAATGATGAAATTGCTGCTGATTTGAAAGAGCACGTGATTAAGCATGTGATCCCTGAGAAGTACTTGGATGAGAAGACCATCTTCCATCTGAATCCTTCTGGGCGTTTTGTGATTGGGGGGCCTCATGGGGATGCTGGCCTTACTGGGAGGAAGATTATAGTTGATACTTATGGTGGTTGGGGTGCACATGGTGGTGGAGCTTTTTCTGGGAAAGATCCTACTAAGGTTGATAGGAGTGGAGCCTATATTGCTAGGCAGGCTGCCAAGAGTATTGTGGCGAATGGGCTTGCTAGAAGGTGTATTGTGCAAATCTCATATGCCATTGGTGTTCCTGATCCCTTGTCTGTGTTTGTTGATACTTATGGGACAGGGAAGATGCCAGACAAGGAGATTCTGGAGATTGTGAAGGAAAACTTTGATTTCAGGCCTGGAATGATGTCCATTGACTTGGATCTCAAGAGGGGTGGAAATGGAAGGTTCTTCAAAACTGCTGCTTATGGCCACTTTGGAAGAGACGACCCTGACTTCACTTGGGAGGTGGTTAAGCCTCTCAAGTGGGAGGACAAGCCCCAACAATAA 1185 0.4743 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANIDYEKIVRQTCRSIGFISNDVGLDADNCKVLLCIEQQSPDIAQGVHGHLTKQPQDIGAGDQGHMFGYATDETPELMPLSHVLATQLGARLTQVRKNGTCPWLRPDGKTQVTVEYYNDRGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKHVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQISYAIGVPDPLSVFVDTYGTGKMPDKEILEIVKENFDFRPGMMSIDLDLKRGGNGRFFKTAAYGHFGRDDPDFTWEVVKPLKWEDKPQQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0285 394 CDD S-AdoMet_synt 5 384 - -
Sto8g0285 394 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Sto8g0285 394 SUPERFAMILY S-adenosylmethionine synthetase 116 239 IPR022636 GO:0004478|GO:0006556
Sto8g0285 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto8g0285 394 PIRSF MAT 1 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto8g0285 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Sto8g0285 394 Gene3D - 11 280 - -
Sto8g0285 394 SUPERFAMILY S-adenosylmethionine synthetase 240 388 IPR022636 GO:0004478|GO:0006556
Sto8g0285 394 TIGRFAM metK: methionine adenosyltransferase 5 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto8g0285 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Sto8g0285 394 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Sto8g0285 394 Hamap S-adenosylmethionine synthase [metK]. 2 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Sto8g0285 394 Gene3D - 4 243 - -
Sto8g0285 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 1 390 - -
Sto8g0285 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Sto8g0285 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 381 IPR022630 GO:0004478|GO:0006556
Sto8g0285 394 Gene3D - 117 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0285 Sto-Chr8 1866286 1867470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0285 K00789 - pvy:116110364 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0742 3 5104227 5105414 Sto8g0285 8 1866286 1867470 ECH
Sto8g0285 8 1866286 1867470 Sto8g0285 8 1866286 1867470 ECH