Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0932 ATGGATTCCCTCACTCCCATTCTTCCTTTTGCTTgctttctcctcctcctcctcattcCCACAGAGTCTTTCCTTGTCCTCTGTTTTTACTCTGTTTTTTCACTCtgcttttcctttctttcttcttcttcttcaggtgTTCTGGGTGCTACATTCACTTTCGTGAACCGATGCGAGTACACTGTATGGCCGGGAATTCTTCCAAATGCCGGTAGCCCAAAACTCGATACCACCGGTTTCGAGCTCCCCAGAGACACGGCTCGCACATTCCAAGCCCCCACCGGTTGGTCCGGCCGCTTCTGGGGTCGAACCGGCTGCATCTTCGACGGATCCGGCTCTGGCTCCGGTTCATGTCTCACCGGCGACTGCGGCTCCGGCCAGGTCGAATGCAACGGCGCCGGAGCAGCCCCGCCGGCGACGCTCGCCGAGTTCACCCTGGGAACCGCCGGAGGCCAGGACTTCTACGACGTCAGCCTCGTCGACGGCTACAATCTCCCCATGATCGTGGAGGGGACCGGCGGGTCGGGTCTGTGCGGCTCGACCGGGTGCACCTCGGATCTGAACCTGCAGTGCCCGGCGGAGTTGAGGGTGGGAGACGGCAGCGCGTGCAAGAGCGCGTGTGAGGCTTTCGGGAGCCCGGAGTATTGCTGCAGCGGCGCGTATGGCTCACCGGCGACGTGTAGGCCGTCGATTTACTCGGAGATGTTCAAGAACGCGTGTCCGAGATCGTATAGCTACGCGTACGATGATGCTACGAGTACGTTTACGTGTACGGGAGCGGATTATACGGTCACATTCTGTCCATCCTCTCCAAGgtag 819 0.5556 MDSLTPILPFACFLLLLLIPTESFLVLCFYSVFSLCFSFLSSSSSGVLGATFTFVNRCEYTVWPGILPNAGSPKLDTTGFELPRDTARTFQAPTGWSGRFWGRTGCIFDGSGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTAGGQDFYDVSLVDGYNLPMIVEGTGGSGLCGSTGCTSDLNLQCPAELRVGDGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKNACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0932 272 Gene3D Thaumatin 50 268 IPR037176 -
Sto2g0932 272 SUPERFAMILY Osmotin, thaumatin-like protein 50 269 IPR037176 -
Sto2g0932 272 PANTHER OS03G0233200 PROTEIN 35 271 IPR001938 -
Sto2g0932 272 PIRSF PR5 18 272 IPR001938 -
Sto2g0932 272 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 35 271 - -
Sto2g0932 272 PRINTS Pathogenesis-related protein signature 51 63 IPR001938 -
Sto2g0932 272 PRINTS Pathogenesis-related protein signature 99 110 IPR001938 -
Sto2g0932 272 PRINTS Pathogenesis-related protein signature 153 169 IPR001938 -
Sto2g0932 272 PRINTS Pathogenesis-related protein signature 258 267 IPR001938 -
Sto2g0932 272 ProSiteProfiles Thaumatin family profile. 49 268 IPR001938 -
Sto2g0932 272 Pfam Thaumatin family 56 268 IPR001938 -
Sto2g0932 272 ProSitePatterns Thaumatin family signature. 114 130 IPR017949 -
Sto2g0932 272 SMART tha2 52 268 IPR001938 -
Sto2g0932 272 CDD TLP-PA 51 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0932 Sto-Chr2 8058483 8059380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0932 33 269 Receptor kinase-like Gene Family AT5G38280 49.398 1.82e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0932 - - gmx:100801173 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0932 2 8058483 8059380 Sto2g0932 2 8058483 8059380 ECH
Sto2g0932 2 8058483 8059380 Sto10g0079 10 599240 601227 ECH
Sto2g0932 2 8058483 8059380 Sto6g3938 6 43492959 43494239 ECH