Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0079 ATGGAAGCTCCCAtccctctcttcctcttctcttctcttcttctcctcatTCCCACAGCTGTTCTCGCTACCACATTCACATTTGTGAATCGTTGCGACTACACCGTCTGGCCTGGAATTCTCGCTAATGCTGGCAGTGGAAACCTTGGTACTACTGGATTTGAGCTTCCCAAAGACACTTCCCGCTCTTTCCTAGCTCCCACCGGCTGGTCCGGCCGCTTCTGGGCTCGAACCGCCTGCAATTTCGACTCCGGATCCGGTTCGTGTGTCACCGGCGACTGCGGCTCCGGCCAGCTCGAGTGCAACGGAGCCGGAGCTTCCCCGCCGGTGACTCTGGCTGAGTTCACGCTTGGCACCGGGGGGCAAGATTTCTACGACGTCAGTCTGGTCGATGGGTACAATGTTCCGATGATCGTGGAGGGGACCGGCGGGTCGGGTCCGTGCGAGTCTACCGGGTGCACGTCGGATCTGAACCGGCAATGTCCGGAGGAGCTGAGAGTGGGGGATGGAGACGCGTGCAAGAGCGCGTGCGAGGCTTTTAGTAGCCCCGAGTATTGTTGCAGCGGCGCGTATAGTTCACCGGCGACGTGTAAGCCGTCGATGTACTCGGAGATGTTTAAGGCGGTTTGCCCGAGATCGTATAGCTACGCCTACGATGATGCTACCAGGTCGGGTACCGGATCTGGGGAGGCCATGCTTGCAGATAGGTCATATCTAGCTGGTTTGGCCATGGGAGGCTCCACCACCATAGTGCCTATGTCTTCAATAAAATCTGCATTTGTTATCACTTTTAGCTTTTTGCTTAGTATTGTCTTCCTCCTTTAG 825 0.5406 MEAPIPLFLFSSLLLLIPTAVLATTFTFVNRCDYTVWPGILANAGSGNLGTTGFELPKDTSRSFLAPTGWSGRFWARTACNFDSGSGSCVTGDCGSGQLECNGAGASPPVTLAEFTLGTGGQDFYDVSLVDGYNVPMIVEGTGGSGPCESTGCTSDLNRQCPEELRVGDGDACKSACEAFSSPEYCCSGAYSSPATCKPSMYSEMFKAVCPRSYSYAYDDATRSGTGSGEAMLADRSYLAGLAMGGSTTIVPMSSIKSAFVITFSFLLSIVFLL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0079 274 ProSiteProfiles Thaumatin family profile. 23 229 IPR001938 -
Sto10g0079 274 SMART tha2 26 229 IPR001938 -
Sto10g0079 274 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 12 229 - -
Sto10g0079 274 SUPERFAMILY Osmotin, thaumatin-like protein 24 227 IPR037176 -
Sto10g0079 274 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Sto10g0079 274 Gene3D Thaumatin 24 240 IPR037176 -
Sto10g0079 274 CDD TLP-PA 25 229 - -
Sto10g0079 274 Pfam Thaumatin family 30 224 IPR001938 -
Sto10g0079 274 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Sto10g0079 274 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Sto10g0079 274 PRINTS Pathogenesis-related protein signature 85 114 IPR001938 -
Sto10g0079 274 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Sto10g0079 274 PANTHER OS03G0233200 PROTEIN 12 229 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0079 Sto-Chr10 599240 601227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0079 8 224 Receptor kinase-like Gene Family AT5G38280 47.619 2.55e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0079 - - mnt:21407701 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0079 10 599240 601227 Sto10g0079 10 599240 601227 ECH
Sto2g0932 2 8058483 8059380 Sto10g0079 10 599240 601227 ECH
Sto10g0079 10 599240 601227 Sto6g3938 6 43492959 43494239 ECH