Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3102 ATGGAGTTTCACATGTGCATGAGGATTGAAGAGAGTGACAAAAAGTgtgagaagaaagaagaggcCACGTGGGGCCCATGTGAGTGGAGGATGAGCGAGCAGAGTGAGCAACACAACCAGCTGGTGGCGCACAACTCAGGGAGCCTCAGCTTTAGCAGCCATTTGTCCAAGGAAGATGAGGAGATGTCAAGGTCCGCTCTCTCCACTTTCAAAGCCAAAGAGGAAGAGATCGAAAGGAAGAAGCTCCAAGTCAGAGAGAAGGTTCAGGCACAGTTGGGTCGAGTCGAGGAAGAAACCAAGCGTCTCGCCTTAATTCGTGAGGAACATCAGGAGCTGGAAACCCTGGCAGATCCGATGAGGAAGGAAGTAGCACTGGTCCGAAAAAAGATCGATTCAATAAACAAAGAGTTAAAGCCACTAGGCAGTACCTGCCAGAAGAAGGAGAAAGAATACAAAGAAGCTCTTGAAGCTTTTAATGAAAAGAACAGAGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGAGTGAAAGTGAGAAATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATTGAATCCATGAACTGA 597 0.4506 MEFHMCMRIEESDKKCEKKEEATWGPCEWRMSEQSEQHNQLVAHNSGSLSFSSHLSKEDEEMSRSALSTFKAKEEEIERKKLQVREKVQAQLGRVEEETKRLALIREEHQELETLADPMRKEVALVRKKIDSINKELKPLGSTCQKKEKEYKEALEAFNEKNREKVQLITKLMELVSESEKLRMKKLEELSKNIESMN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3102 198 PANTHER RAB6-INTERACTING PROTEIN GORAB 35 197 IPR007033 -
Sto13g3102 198 Coils Coil 95 115 - -
Sto13g3102 198 PANTHER EXPRESSED PROTEIN 35 197 - -
Sto13g3102 198 Coils Coil 144 164 - -
Sto13g3102 198 Pfam Transcriptional activator 45 196 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3102 Sto-Chr13 35413411 35418528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3102 - - gmx:100527015 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3102 13 35413411 35418528 Sto8g2535 8 17615440 17617199 ECH
Sto13g3102 13 35413411 35418528 Sto13g3102 13 35413411 35418528 ECH
Sto13g3102 13 35413411 35418528 Sto12g0393 12 2498094 2499491 ECH
Sto13g3102 13 35413411 35418528 Sto7g0808 7 6036206 6039569 ECH