Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0393 ATGATAGGTGGTCTCAATCTCATAAAGCACCTAAAGCAAAGGCTAGAGAGGTACCATTATAATTccaaggaaaagaagaaagaagagatgATGTTGATGAGAGGAATGGAAACGCCATGTAATGATGAGATTAATATTGATCATGATGAAGAGGACATGTCAAGGACAGCATTGGCATTGTTGCGAGCAAAGGAAGAAGAGATTGAGAAGAAGACAAAGGAGGTGAAGACCAAGCTTCATGCACATCTGGCTCATGCACAAGAGGAATCAAACCGCTTGTCTCAGATTAGACAAGAGCTAGAGGGTCTCATAGATCCAACGAGGAAACAAGTTACAATGGTTCGAAAGAAGATGGACTCAGTTAACAAAGAGTTGAAGCCACTGGCCCAAACTTGCCAGAAAAAGgaggaaGAATACAAGCAGGCCCTTGAGGCTTTCAATGAGAAGAACAGTGAGAAAGCTCAACTTGTTGCCAAATTAAAAGagTTGGTGACTAAAAGTGAGAGGTTGAGGATGGAGAAGCTTGAGGAGCTAAGCAATGACTTAGATAATCTGCACTGa 561 0.3939 MIGGLNLIKHLKQRLERYHYNSKEKKKEEMMLMRGMETPCNDEINIDHDEEDMSRTALALLRAKEEEIEKKTKEVKTKLHAHLAHAQEESNRLSQIRQELEGLIDPTRKQVTMVRKKMDSVNKELKPLAQTCQKKEEEYKQALEAFNEKNSEKAQLVAKLKELVTKSERLRMEKLEELSNDLDNLH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0393 186 Coils Coil 83 103 - -
Sto12g0393 186 Coils Coil 58 81 - -
Sto12g0393 186 PANTHER - 29 185 - -
Sto12g0393 186 PANTHER RAB6-INTERACTING PROTEIN GORAB 29 185 IPR007033 -
Sto12g0393 186 Coils Coil 129 173 - -
Sto12g0393 186 Coils Coil 8 28 - -
Sto12g0393 186 Pfam Transcriptional activator 44 183 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0393 Sto-Chr12 2498094 2499491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0393 - - ccaj:109798987 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0393 12 2498094 2499491 Sto12g0393 12 2498094 2499491 ECH
Sto12g0393 12 2498094 2499491 Sto7g0808 7 6036206 6039569 ECH
Sto13g3102 13 35413411 35418528 Sto12g0393 12 2498094 2499491 ECH