Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2535 atgaaGAACGTTATTGGGAGTAGTAGTAGTACAATAGGAAGCAGTGGGAGGGTATCAACAGATCAGGATTATCATGAAGATGGTGATGATCAGCAGATTTCAAAAATGGCCATTTCCACATTTAAAGCTAAGGAAGAAGAGATTGAGAGGAAGAAGATGCAAGTGAGACAGAAAGTTGAGCTTCAGCTTGGACGTGCTGAAGAAGAGACTAGACGCTTAGCACATATTTGGGAAGAGTTTTGtgtgagaaagaaaatgagggaaTGGGTGGAGTCCACCTTTGAAATGGTGGGTCTCACTTCTGAAATGGAGCTTGAAGTGTTGGAAGATCCTTTGAAAAAGGAAGTTGCAATGGTTCGTAAGAAGATTGATATGACTAACAGAGATTTGAAGCCACTTGGACAAAGTTGCCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTAGAAGCTTTCAATGAGAAGAACAAAGAGAAATCTCATCTGGTTGCCACATTAATGGAGCTGCTGACTGAGAGTGAAAGAATCAGGATGAAGAAACTAGAGGAGCTGAGCAAGATCATAGAATCCATGCactaa 576 0.3889 MKNVIGSSSSTIGSSGRVSTDQDYHEDGDDQQISKMAISTFKAKEEEIERKKMQVRQKVELQLGRAEEETRRLAHIWEEFCVRKKMREWVESTFEMVGLTSEMELEVLEDPLKKEVAMVRKKIDMTNRDLKPLGQSCQKKEKEYKEALEAFNEKNKEKSHLVATLMELLTESERIRMKKLEELSKIIESMH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2535 191 MobiDBLite consensus disorder prediction 1 32 - -
Sto8g2535 191 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 104 190 - -
Sto8g2535 191 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 9 82 - -
Sto8g2535 191 MobiDBLite consensus disorder prediction 1 19 - -
Sto8g2535 191 PANTHER RAB6-INTERACTING PROTEIN GORAB 104 190 IPR007033 -
Sto8g2535 191 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 82 IPR007033 -
Sto8g2535 191 Coils Coil 137 157 - -
Sto8g2535 191 Pfam Transcriptional activator 103 189 IPR007033 -
Sto8g2535 191 Pfam Transcriptional activator 15 81 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2535 Sto-Chr8 17615440 17617199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2535 - - gmx:100794044 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3102 13 35413411 35418528 Sto8g2535 8 17615440 17617199 ECH
Sto8g2535 8 17615440 17617199 Sto8g2535 8 17615440 17617199 ECH