Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1536 ATGGAAGAAACTGGAGCTGGTGATATCGCAGAGATGGCTATTGCAAATTGGGTGAACGACGTCTCGACAATGTGCCAATACTATTTGGATCGATGGACCCCTCACACTGCTCAAAGATGGATAGGAACACTCGCGATTGCAATCATATACACATTTCGCATTTACTATGTTGATGGATTTTACCTAATCACATACGCTCTAGGGATTTATATCTTGAATCTTTTAATAGGATTTCTTTCGCCAAAAGTTGATCCACAGACTCGACCTCAAGATCCGTCTATATTACCCACCAAAGATTCTGATGATTTCAAGCCTTTCATTCGTCGCCTCCCTGAATTTAAGTTTTGGTACTCTGTGACAAAGGCTTTTGTTATTGCGTTTGTCTTGACATTCTTCCCTGTGTTGGATATTCCTGTTTTTGTGCCAATATTGATATGCTATTGGATACTACTGTTCATTCTCACTATGAGGCGTCAAATCGTACACATGATAAAGTACAAGTATGTCccatttgatattggaaagaaggTGTGCTCTTTTAACTTATGGTGTTTTTTTATGTAA 564 0.3741 MEETGAGDIAEMAIANWVNDVSTMCQYYLDRWTPHTAQRWIGTLAIAIIYTFRIYYVDGFYLITYALGIYILNLLIGFLSPKVDPQTRPQDPSILPTKDSDDFKPFIRRLPEFKFWYSVTKAFVIAFVLTFFPVLDIPVFVPILICYWILLFILTMRRQIVHMIKYKYVPFDIGKKVCSFNLWCFFM 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1536 187 Pfam Rer1 family 17 176 IPR004932 GO:0016021
Sto11g1536 187 PANTHER PROTEIN RER1D 2 177 - -
Sto11g1536 187 PIRSF AtER_Rer1p 1 181 IPR004932 GO:0016021
Sto11g1536 187 PANTHER PROTEIN RER1 2 177 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1536 Sto-Chr11 14547332 14548006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1536 1 176 Miscellaneous Gene Families AT2G21600 62.360 3.12e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1536 - - csin:114318812 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0216 5 1291317 1294598 Sto11g1536 11 14547332 14548006 ECH
Sto11g1536 11 14547332 14548006 Sto11g1536 11 14547332 14548006 ECH
Sto2g0729 2 6234760 6236216 Sto11g1536 11 14547332 14548006 ECH
Sto10g0168 10 1359952 1361525 Sto11g1536 11 14547332 14548006 ECH