Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0168 ATGGAGGGAGTTGGAGGTGGCAGTGCCTCGGCTGCTGCTGCACCTGTGAACCAAGGGGTGCAGGACTTCATGAGGCTATATCAATATTATCTGGATAAAACTACTCCTCATACTACGTATAGATGGATTGGGACTTCGGTTTTGATATTAATCTACGTTTTGAGGGTTTATTATGTCGAAGGCTTCTACATTGTCTCATATGGACTGGGAATCTATTTGCTGAATCTGTTGATTTTGTTTCTGTCTCCTTTGGTTGATCCGGGGCTGGAACCTTCTGATGGAGGACCCTTGCTGCCAACAAAAGGTTCTGATGAGTTCAAGCCATTCATTCGCCGACTTCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTGTTATGACCTTCTTTTCCATATTTGATGTTCCTGTCTTTTGGCCAGTATTACTCTTTTACTGGGTTGTTCTGTTTGTCCTTACGATGAGGCGCCAAGTTGCGCACATGATCAAATACAAATATGTCCCATTAAACATAGGAAAGCAGgtgatttttcatttattttgtgCACCTATCCTAAATATTGCATATGTTGTGCGTCAATTCCACTAG 603 0.4096 MEGVGGGSASAAAAPVNQGVQDFMRLYQYYLDKTTPHTTYRWIGTSVLILIYVLRVYYVEGFYIVSYGLGIYLLNLLILFLSPLVDPGLEPSDGGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPVLLFYWVVLFVLTMRRQVAHMIKYKYVPLNIGKQVIFHLFCAPILNIAYVVRQFH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0168 200 PANTHER PROTEIN RER1A 1 180 - -
Sto10g0168 200 Pfam Rer1 family 21 179 IPR004932 GO:0016021
Sto10g0168 200 PIRSF AtER_Rer1p 4 184 IPR004932 GO:0016021
Sto10g0168 200 PANTHER PROTEIN RER1 1 180 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0168 Sto-Chr10 1359952 1361525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0168 1 179 Miscellaneous Gene Families AT2G21600 77.095 1.90e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0168 - - mnt:21401534 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0168 10 1359952 1361525 Sto10g0168 10 1359952 1361525 ECH
Sto2g0729 2 6234760 6236216 Sto10g0168 10 1359952 1361525 ECH
Sto10g0168 10 1359952 1361525 Sto11g1536 11 14547332 14548006 ECH